RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CPP00450 1065 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 APRTP07741 180 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 SLC2A3P11169 496 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 MLNP12872 115 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 CPB1P15086 417 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 ERCC2P18074 760 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 HOXC13P31276 330 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 CCR1P32246 355 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 RFC2P35250 354 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 SLC11A1P49279 550 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 NRG1Q02297 640 aaPredicted RBP13.58□□□□□ -0.24
CPSF4-206ENST00000441580 PPIDQ08752 370 aaKnown RBP13.58□□□□□ -0.24
CPSF4-206ENST00000441580 GALNT2Q10471 571 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 MTA1Q13330 715 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 MRPL58Q14197 206 aaKnown RBP13.58□□□□□ -0.24
CPSF4-206ENST00000441580 FAM171A1Q5VUB5 890 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 C1orf53Q5VUE5 145 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 TTC19Q6DKK2 380 aaPredicted RBP13.58□□□□□ -0.24
CPSF4-206ENST00000441580 ITPRIPL1Q6GPH6 555 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 ANKS3Q6ZW76 656 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 ANKMY2Q8IV38 441 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 SCN4BQ8IWT1 228 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 PALM2Q8IXS6 379 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 NUP93Q8N1F7 819 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 CEP295NLQ96MC4 621 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 HAPLN3Q96S86 360 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 CYTH2Q99418 400 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 VAT1Q99536 393 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 WDR83Q9BRX9 315 aaKnown RBP13.58□□□□□ -0.24
CPSF4-206ENST00000441580 NSRP1Q9H0G5 558 aaKnown RBP13.58□□□□□ -0.24
CPSF4-206ENST00000441580 RNF208Q9H0X6 261 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 ETNK1Q9HBU6 452 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 OLA1Q9NTK5 396 aaKnown RBP13.58□□□□□ -0.24
CPSF4-206ENST00000441580 NKIRAS1Q9NYS0 192 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 FNIP2Q9P278 1114 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 IGSF9Q9P2J2 1179 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 CTNNAL1Q9UBT7 734 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 SMG5Q9UPR3 1016 aaKnown RBP13.58□□□□□ -0.24
CPSF4-206ENST00000441580 TEX264Q9Y6I9 313 aa13.58□□□□□ -0.24
CPSF4-206ENST00000441580 ATXN2Q99700 1313 aaKnown RBP13.58□□□□□ -0.24
CPSF4-206ENST00000441580 TMEM120BA0PK00 339 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 TBKBP1A7MCY6 615 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 OR4Q2P0C623 313 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 ELK3P41970 407 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 MAGEA3P43357 314 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 PSEN1P49768 467 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 NRLP54845 237 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 GPX6P59796 221 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 GAD2Q05329 585 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 AP1B1Q10567 949 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 EIF4EBP2Q13542 120 aaPredicted RBP13.57□□□□□ -0.24
CPSF4-206ENST00000441580 GPNMBQ14956 572 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 MSS51Q4VC12 460 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 ANKRD20A2Q5SQ80 823 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 ACBD5Q5T8D3 534 aaPredicted RBP13.57□□□□□ -0.24
CPSF4-206ENST00000441580 ANKRD20A1Q5TYW2 823 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 ANKRD20A3Q5VUR7 823 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 CTU1Q7Z7A3 348 aaKnown RBP13.57□□□□□ -0.24
CPSF4-206ENST00000441580 EXOC3L1Q86VI1 746 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 MON1AQ86VX9 555 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 NLRP14Q86W24 1093 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 TAB3Q8N5C8 712 aaPredicted RBP13.57□□□□□ -0.24
CPSF4-206ENST00000441580 ATXN2LQ8WWM7 1075 aaKnown RBP13.57□□□□□ -0.24
CPSF4-206ENST00000441580 TBC1D31Q96DN5 1066 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 SGSM3Q96HU1 749 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 DHRS4Q9BTZ2 278 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 CATSPERBQ9H7T0 1116 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 SSU72Q9NP77 194 aaKnown RBP13.57□□□□□ -0.24
CPSF4-206ENST00000441580 MFHAS1Q9Y4C4 1052 aa13.57□□□□□ -0.24
CPSF4-206ENST00000441580 SCN5AQ14524 2016 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 GMNCA6NCL1 334 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 ERI2A8K979 691 aaKnown RBP13.56□□□□□ -0.24
CPSF4-206ENST00000441580 RASA4BC9J798 803 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 POC1B-GALNT4F8VUJ3 575 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 RASA4O43374 803 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 BANF1O75531 89 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 LRIG2O94898 1065 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 ALDH2P05091 517 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 BRAFP15056 766 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 GCAP28676 217 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 EPHB2P29323 1055 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 SLC18A1P54219 525 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 RPL10AP62906 217 aaKnown RBP13.56□□□□□ -0.24
CPSF4-206ENST00000441580 IFRD2Q12894 506 aaPredicted RBP13.56□□□□□ -0.24
CPSF4-206ENST00000441580 PARP6Q2NL67 630 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 FAXCQ5TGI0 409 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 CNKSR3Q6P9H4 555 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 CAPN12Q6ZSI9 719 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 DENND5BQ6ZUT9 1274 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 MICALCLQ6ZW33 695 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 B4GALNT4Q76KP1 1039 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 TRABD2AQ86V40 505 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 CCNJLQ8IV13 435 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 SRRM1Q8IYB3 904 aaKnown RBP13.56□□□□□ -0.24
CPSF4-206ENST00000441580 CRIPAKQ8N1N5 446 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 LZTR1Q8N653 840 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 CCNYQ8ND76 341 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 SCAMP5Q8TAC9 235 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 FBF1Q8TES7 1133 aa13.56□□□□□ -0.24
CPSF4-206ENST00000441580 DYDC1Q8WWB3 177 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms