RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 C9orf72Q96LT7 481 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 SLC2A13Q96QE2 648 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 SYT15Q9BQS2 421 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 NRDE2Q9H7Z3 1164 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 VPS37BQ9H9H4 285 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 LRRC4Q9HBW1 653 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 PNPLA8Q9NP80 782 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 PPANQ9NQ55 473 aaKnown RBP9.46□□□□□ -0.9
HDAC6-209ENST00000440653 CNGB3Q9NQW8 809 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 KRT82Q9NSB4 513 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 KLK14Q9P0G3 267 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 SAMD15Q9P1V8 674 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 XPO7Q9UIA9 1087 aaKnown RBP9.46□□□□□ -0.9
HDAC6-209ENST00000440653 ST3GAL5Q9UNP4 418 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 NME7Q9Y5B8 376 aa9.46□□□□□ -0.9
HDAC6-209ENST00000440653 GOLGA6L7A0A1B0GV03 622 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 TMEM120BA0PK00 339 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 FAM47DPA6NHR8 397 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 TULP2O00295 520 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 PPP1R12AO14974 1030 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 GRAP2O75791 330 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 TMEM63AO94886 807 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 CYP11A1P05108 521 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 BRAFP15056 766 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 PTPN1P18031 435 aaKnown RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 TKTP29401 623 aaKnown RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 GDF10P55107 478 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 GEMIN4P57678 1058 aaKnown RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 SARNPP82979 210 aaKnown RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 ZNF200P98182 395 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 CDK16Q00536 496 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 TMED2Q15363 201 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 CTC1Q2NKJ3 1217 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 TIGD5Q53EQ6 642 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 ZC3H12AQ5D1E8 599 aaKnown RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 FAM26DQ5JW98 314 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 GDF6Q6KF10 455 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 SCYL2Q6P3W7 929 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 CLEC20AQ6ZU45 233 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 PDZD4Q76G19 769 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 BEND5Q7L4P6 421 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 BNIPLQ7Z465 357 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 TRABD2AQ86V40 505 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 PIGZQ86VD9 579 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 EXOC3L1Q86VI1 746 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 OSTM1Q86WC4 334 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 METTL23Q86XA0 190 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 CCDC13Q8IYE1 715 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 FUKQ8N0W3 1084 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 VPS52Q8N1B4 723 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 TMEM130Q8N3G9 435 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 FAM71DQ8N9W8 422 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 MCUQ8NE86 351 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 PPP1R13LQ8WUF5 828 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 NT5C3BQ969T7 300 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 FAM149B1Q96BN6 582 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 SENP8Q96LD8 212 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 RIPOR3Q96MK2 946 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 SMC6Q96SB8 1091 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 RAD9AQ99638 391 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 MED10Q9BTT4 135 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 SEZ6LQ9BYH1 1024 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 RNF39Q9H2S5 420 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 ACTR5Q9H9F9 607 aaPredicted RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 POPDC2Q9HBU9 364 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 XAB2Q9HCS7 855 aaKnown RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 EIF2B3Q9NR50 452 aaKnown RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 DNAJC17Q9NVM6 304 aaKnown RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 DDX43Q9NXZ2 648 aaKnown RBP9.45□□□□□ -0.9
HDAC6-209ENST00000440653 FAM169AQ9Y6X4 670 aa9.45□□□□□ -0.9
HDAC6-209ENST00000440653 ARL5CA6NH57 179 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 RASA4BC9J798 803 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 MYO1CO00159 1063 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 LINC01565O15544 149 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 KCNN4O15554 427 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 RASA4O43374 803 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 TBX10O75333 385 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 GJB5O95377 273 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 ZSCAN5DPP0CG00 497 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 LCP1P13796 627 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 DRD4P21917 467 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 L1CAMP32004 1257 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 GBP2P32456 591 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 HTR7P34969 479 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 SERPINB6P35237 376 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 FDFT1P37268 417 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 YWHAZP63104 245 aaKnown RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 IFI35P80217 286 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 IL9RQ01113 521 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 ADCY1Q08828 1119 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 MMRN1Q13201 1228 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 TUSC3Q13454 348 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 SMAD4Q13485 552 aaKnown RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 GPNMBQ14956 572 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 TAF5Q15542 800 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 RSPO4Q2I0M5 234 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 PPP6R3Q5H9R7 873 aaPredicted RBP9.44□□□□□ -0.9
HDAC6-209ENST00000440653 MDH1BQ5I0G3 518 aa9.44□□□□□ -0.9
HDAC6-209ENST00000440653 HEATR6Q6AI08 1181 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms