RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 MOCS2O96007 188 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 FTLP02792 175 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 PDGFRAP16234 1089 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 RRM1P23921 792 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 HOXD9P28356 352 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 SDC4P31431 198 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 SLC6A4P31645 630 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 RDXP35241 583 aaKnown RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 PTPN9P43378 593 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 MRPS21P82921 87 aaKnown RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 KDSRQ06136 332 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 TCF15Q12870 199 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 TBX2Q13207 712 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 GAS6Q14393 721 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 ANGPT1Q15389 498 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 HSF5Q4G112 596 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 MS4A13Q5J8X5 152 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 RNF43Q68DV7 783 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 TRNP1Q6NT89 227 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 Q6ZS52 159 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 STRADAQ7RTN6 431 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 PHLDB2Q86SQ0 1253 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 CNGA4Q8IV77 575 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 EMC1Q8N766 993 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 HJURPQ8NCD3 748 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 RXFP2Q8WXD0 754 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 BHMTQ93088 406 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 P2RY11Q96G91 374 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 MRFAP1L1Q96HT8 127 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 CFAP57Q96MR6 1250 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 ISCUQ9H1K1 167 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 WDCPQ9H6R7 721 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 PRMT8Q9NR22 394 aaPredicted RBP12.25□□□□□ -0.45
HSPG2-206ENST00000439717 PIGVQ9NUD9 493 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 PARVAQ9NVD7 372 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 ARHGEF38Q9NXL2 777 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 PLK2Q9NYY3 685 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 COX16Q9P0S2 106 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 CALCOCO1Q9P1Z2 691 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 ADAMTS1Q9UHI8 967 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 STARD13Q9Y3M8 1113 aa12.25□□□□□ -0.45
HSPG2-206ENST00000439717 GOLGA6L7A0A1B0GV03 622 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 F5H5T6 163 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 MFAP3LO75121 409 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 MYBL1P10243 752 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 TFE3P19532 575 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-206ENST00000439717 TACR2P21452 398 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 GPD1P21695 349 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 RFC1P35251 1148 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-206ENST00000439717 CXCL12P48061 93 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 ZNF75DP51815 510 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 MESP2Q0VG99 397 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 E2F5Q15329 346 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 ZNF528Q3MIS6 628 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 CCDC14Q49A88 953 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 PPP1R15BQ5SWA1 713 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 TTC39BQ5VTQ0 682 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-206ENST00000439717 RAP1GAP2Q684P5 730 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 PLEKHA7Q6IQ23 1121 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 RFWD3Q6PCD5 774 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 KIAA1549LQ6ZVL6 1849 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 TMC6Q7Z403 805 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 TRMT11Q7Z4G4 463 aaKnown RBP12.24□□□□□ -0.45
HSPG2-206ENST00000439717 CHSY1Q86X52 802 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 MAML2Q8IZL2 1156 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-206ENST00000439717 JOSD2Q8TAC2 188 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 USP33Q8TEY7 942 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 CENPIQ92674 756 aaPredicted RBP12.24□□□□□ -0.45
HSPG2-206ENST00000439717 ACDQ96AP0 544 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 PRMT1Q99873 361 aaKnown RBP12.24□□□□□ -0.45
HSPG2-206ENST00000439717 ADAM33Q9BZ11 813 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 TKTL2Q9H0I9 626 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 ABHD10Q9NUJ1 306 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 ARHGAP20Q9P2F6 1191 aa12.24□□□□□ -0.45
HSPG2-206ENST00000439717 XPO7Q9UIA9 1087 aaKnown RBP12.24□□□□□ -0.45
HSPG2-206ENST00000439717 SSU72P8A0A1W2PR75 194 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 AKR1B15C9JRZ8 316 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-206ENST00000439717 TRIM24O15164 1050 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 TIMM44O43615 452 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 TBL1XO60907 577 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 PAGE1O75459 146 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 GJB6O95452 261 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 ADCY5O95622 1261 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 PLEKP08567 350 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-206ENST00000439717 DESP17661 470 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 KIR2DL1P43626 348 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-206ENST00000439717 SGSHP51688 502 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 ZNF143P52747 638 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-206ENST00000439717 ATP11AP98196 1134 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-206ENST00000439717 MAMLD1Q13495 774 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 C10orf76Q5T2E6 689 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 DCUN1D2Q6PH85 259 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 WDR59Q6PJI9 974 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 SYT13Q7L8C5 426 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 ANKS1BQ7Z6G8 1248 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 CCDC117Q8IWD4 279 aaPredicted RBP12.23□□□□□ -0.45
HSPG2-206ENST00000439717 LGI2Q8N0V4 545 aa12.23□□□□□ -0.45
HSPG2-206ENST00000439717 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms