RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ADGRF2Q8IZF7 708 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 ZNF786Q8N393 782 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 PLD5Q8N7P1 536 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 AZIN2Q96A70 460 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 OXCT2Q9BYC2 517 aaPredicted RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 IL1RL2Q9HB29 575 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 DCDC2Q9UHG0 476 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 RIPK3Q9Y572 518 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 AKAP10O43572 662 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 BUD23O43709 281 aaKnown RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 TRMUO75648 421 aaKnown RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 OATP04181 439 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 LCP1P13796 627 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 XRCC1P18887 633 aaPredicted RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 EEF1B2P24534 225 aaKnown RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 ADORA2AP29274 412 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 GABRB2P47870 512 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 PLOD1Q02809 727 aaPredicted RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 PRPSAP1Q14558 356 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 KCNJ11Q14654 390 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 TMEM198Q66K66 360 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 ITPRIPL1Q6GPH6 555 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 C16orf87Q6PH81 154 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 NIPA1Q7RTP0 329 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 STRA8Q7Z7C7 330 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 CLVS1Q8IUQ0 354 aaPredicted RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 WDR49Q8IV35 697 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 BRSK2Q8IWQ3 736 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 SULF1Q8IWU6 871 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 NLGN1Q8N2Q7 840 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 CATSPER1Q8NEC5 780 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 ERLEC1Q96DZ1 483 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 ZFRQ96KR1 1074 aaKnown RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 CCDC28BQ9BUN5 200 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 DDX43Q9NXZ2 648 aaKnown RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 DNAJB4Q9UDY4 337 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 ITGA11Q9UKX5 1188 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 HEMK1Q9Y5R4 338 aaPredicted RBP9.3□□□□□ -0.92
COPB1-202ENST00000439561 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
COPB1-202ENST00000439561 MAST2Q6P0Q8 1798 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 RNF103-CHMP3A0A140T963 221 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 PLIN3O60664 434 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 GJB1P08034 283 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 MCF2P10911 925 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 TSHRP16473 764 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 ETFBP38117 255 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 PHKA2P46019 1235 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 THOP1P52888 689 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 HPCAP84074 193 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 POU5F1BQ06416 359 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 PTK2BQ14289 1009 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 SLC9B1Q4ZJI4 515 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 CES4AQ5XG92 561 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 PACS1Q6VY07 963 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 XYLT1Q86Y38 959 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 MYO1HQ8N1T3 1032 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 ARFGAP1Q8N6T3 406 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 MCUQ8NE86 351 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 TSPAN14Q8NG11 270 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 ZFP28Q8NHY6 868 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 TFB1MQ8WVM0 346 aaKnown RBP9.29□□□□□ -0.92
COPB1-202ENST00000439561 CDHR1Q96JP9 859 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 WRNIP1Q96S55 665 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 PEBP4Q96S96 227 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 NTPCRQ9BSD7 190 aaKnown RBP9.29□□□□□ -0.92
COPB1-202ENST00000439561 HAPLN2Q9GZV7 340 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 ILKAPQ9H0C8 392 aaPredicted RBP9.29□□□□□ -0.92
COPB1-202ENST00000439561 CNTN3Q9P232 1028 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 HMGXB4Q9UGU5 601 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 PAIP2BQ9ULR5 123 aaKnown RBP9.29□□□□□ -0.92
COPB1-202ENST00000439561 SORCS3Q9UPU3 1222 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 PHF24Q9UPV7 400 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 ARFGEF1Q9Y6D6 1849 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 WDR46O15213 610 aaKnown RBP9.29□□□□□ -0.92
COPB1-202ENST00000439561 OGTO15294 1046 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 BIRC5O15392 142 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 MPSTP25325 297 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 ADORA2BP29275 332 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 FSTL1Q12841 308 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 DLG2Q15700 870 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 AMHR2Q16671 573 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 MYLK3Q32MK0 819 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 SEL1L3Q68CR1 1132 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 C15orf39Q6ZRI6 1047 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 CAND1Q86VP6 1230 aaKnown RBP9.29□□□□□ -0.92
COPB1-202ENST00000439561 C12orf29Q8N999 325 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 SNX31Q8N9S9 440 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 COLGALT1Q8NBJ5 622 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 OR52B2Q96RD2 323 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 LGMNQ99538 433 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 NPAS2Q99743 824 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 SNRNP25Q9BV90 132 aaKnown RBP9.29□□□□□ -0.92
COPB1-202ENST00000439561 SLC4A5Q9BY07 1137 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 GCOM2Q9BZD3 368 aaPredicted RBP9.29□□□□□ -0.92
COPB1-202ENST00000439561 WDR41Q9HAD4 459 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 CYTH4Q9UIA0 394 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 PSAT1Q9Y617 370 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 A0A096LPK6 155 aa9.29□□□□□ -0.92
COPB1-202ENST00000439561 SPDYE2BA6NHP3 402 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms