RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 BTKQ06187 659 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 TRIM14Q14142 442 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 KCNJ12Q14500 433 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 STARD3Q14849 445 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 MPEG1Q2M385 716 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 Q4G0T1 1027 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 AWAT1Q58HT5 328 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 EPHA10Q5JZY3 1008 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 C10orf25Q5T742 122 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 GRHL2Q6ISB3 625 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 TMEM65Q6PI78 240 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 CLEC9AQ6UXN8 241 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 DCDC5Q6ZRR9 648 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 SYTL1Q8IYJ3 562 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 CCDC150Q8NCX0 1101 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 NGDNQ8NEJ9 315 aaKnown RBP3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 C16orf52Q8NHV5 167 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 C18orf8Q96DM3 657 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 P2RY11Q96G91 374 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 VPS50Q96JG6 964 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 SIGLEC11Q96RL6 698 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 WDR24Q96S15 920 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 GDF15Q99988 308 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 CRB3Q9BUF7 120 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 MYO1AQ9UBC5 1043 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 LRCH1Q9Y2L9 728 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 ZNF521Q96K83 1311 aa3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 AHDC1Q5TGY3 1603 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P12-201ENST00000438745 ABCC3O15438 1527 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 UNC13BO14795 1591 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 TIAM1Q13009 1591 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 FAM234BA2RU67 622 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 OR2W5A6NFC9 320 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 CNOT3O75175 753 aaKnown RBP3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 FGBP02675 491 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 RBL1P28749 1068 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 IL6STP40189 918 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 TECP42680 631 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 MMP13P45452 471 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 TRAPPC10P48553 1259 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 HSPA7P48741 367 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 CFHR1Q03591 330 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 SRSF1Q07955 248 aaKnown RBP eCLIP3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 MFSD13AQ14CX5 517 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 GPR162Q16538 588 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 TMTC4Q5T4D3 741 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 FBXO38Q6PIJ6 1188 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 CRTC1Q6UUV9 634 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 VSTM1Q6UX27 236 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 KIAA0408Q6ZU52 694 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 BEND5Q7L4P6 421 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 PIP4P1Q86T03 277 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 MYLK4Q86YV6 388 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 OSR1Q8TAX0 266 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 BRI3BPQ8WY22 251 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 MUL1Q969V5 352 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 PRR11Q96HE9 360 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 COLEC11Q9BWP8 271 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 MAGEB5Q9BZ81 275 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 ZBTB26Q9HCK0 441 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 TMEM8AQ9HCN3 771 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 PTPRHQ9HD43 1115 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 HEYLQ9NQ87 328 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 VPS45Q9NRW7 570 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 ELOVL5Q9NYP7 299 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 MAFFQ9ULX9 164 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 CAMTA1Q9Y6Y1 1673 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 XIRP1Q702N8 1843 aaKnown RBP3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 NUP153P49790 1475 aaKnown RBP3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 RALGAPBQ86X10 1494 aa3.86□□□□□ -1.79
HMGB3P12-201ENST00000438745 PRDM15P57071 1507 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 PODXLO00592 558 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 FYB1O15117 783 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 KCNAB3O43448 404 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 TLR2O60603 784 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 PRAMEF2O60811 474 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 IGKV2-30P06310 120 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 TMEM225BP0DP42 221 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 ARP10275 920 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 HOXD9P28356 352 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 ATICP31939 592 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 GHRHRQ02643 423 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 SLC14A1Q13336 389 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 ZNF268Q14587 947 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 KCNB1Q14721 858 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 ELF2Q15723 593 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 AASDHQ4L235 1098 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 PXDC1Q5TGL8 231 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 BRINP3Q76B58 766 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 KRT27Q7Z3Y8 459 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 CNGA4Q8IV77 575 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 ZNF366Q8N895 744 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 FAM71DQ8N9W8 422 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 GLIS1Q8NBF1 620 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 PRSS3P2Q8NHM4 247 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 WIPF2Q8TF74 440 aaPredicted RBP3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 HIC2Q96JB3 615 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 POLR3GLQ9BT43 218 aa3.85□□□□□ -1.79
HMGB3P12-201ENST00000438745 GATA5Q9BWX5 397 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms