RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 CRTAC1Q9NQ79 661 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 PAK5Q9P286 719 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 SLC17A7Q9P2U7 560 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 CORO1CQ9ULV4 474 aaPredicted RBP14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 IKBKGQ9Y6K9 419 aa14.34□□□□□ -0.11
PTCHD3-201ENST00000438700 A6NHS1 94 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 C9IYK1 514 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 F5H423 210 aaPredicted RBP14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 SMAPO00193 183 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 MDM4O15151 490 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 CHADO15335 359 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 PEX11AO75192 247 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 CBX6O95503 412 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 GNAZP19086 355 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 LHX1P48742 406 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 YWHAZP63104 245 aaKnown RBP14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 TUSC3Q13454 348 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 BIRC2Q13490 618 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 LRRC8DQ7L1W4 858 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 PRPF39Q86UA1 669 aaKnown RBP14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 CCDC185Q8N715 623 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 TBCBQ99426 244 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 SYT15Q9BQS2 421 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 TRIM56Q9BRZ2 755 aaKnown RBP14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 MFHAS1Q9Y4C4 1052 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 ENTPD5O75356 428 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 FAM155BO75949 473 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 BRCC3P46736 316 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 SLC18A1P54219 525 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 SLC10A2Q12908 348 aaPredicted RBP14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 C11orf91Q3C1V1 193 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 PAQR9Q6ZVX9 377 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 SLC24A5Q71RS6 500 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 PIGZQ86VD9 579 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 VSIG1Q86XK7 387 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 ZDHHC17Q8IUH5 632 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 PYROXD2Q8N2H3 581 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 NETO2Q8NC67 525 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 FAM13CQ8NE31 585 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 GRAMD1AQ96CP6 724 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 DEFB118Q96PH6 123 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 ZNF670Q9BS34 389 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 MED10Q9BTT4 135 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 DUSP16Q9BY84 665 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 FETUBQ9UGM5 382 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 AP4E1Q9UPM8 1137 aa14.33□□□□□ -0.12
PTCHD3-201ENST00000438700 XPO1O14980 1071 aaKnown RBP14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 BEST1O76090 585 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 ZWINTO95229 277 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 INHBAP08476 426 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 T-ENOLP0DO92 83 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 SELPP16109 830 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 EPHB2P29323 1055 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 L1CAMP32004 1257 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 RPL34P49207 117 aaKnown RBP14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 CDK7P50613 346 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 RNF43Q68DV7 783 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 FAM131BQ86XD5 332 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 CTAGE3PQ8IX95 158 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 FAM126BQ8IXS8 530 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 FAM149B1Q96BN6 582 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 KLC2Q9H0B6 622 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 PIDD1Q9HB75 910 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 ETNK2Q9NVF9 386 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 ZFATQ9P243 1243 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 STARD13Q9Y3M8 1113 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 NUMBLQ9Y6R0 609 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 SYNJ2BP-COX16A0A087WUM0 186 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 F8W810 466 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 EDF1O60869 148 aaKnown RBP14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 ITGB1P05556 798 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 ODC1P11926 461 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 NPR3P17342 541 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 FAAP100Q0VG06 881 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 GLB1LQ6UWU2 654 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 CD300LGQ6UXG3 332 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 SLC26A9Q7LBE3 791 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 ZNF75CPQ92670 426 aaPredicted RBP14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 SERAC1Q96JX3 654 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 HSFY1Q96LI6 401 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 PLCD4Q9BRC7 762 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 CYLDQ9NQC7 956 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 PAK6Q9NQU5 681 aaPredicted RBP14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 KRT82Q9NSB4 513 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 COX16Q9P0S2 106 aa14.32□□□□□ -0.12
PTCHD3-201ENST00000438700 MYBPHLA2RUH7 354 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 AP1G2O75843 785 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 MT-ND3P03897 115 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 TPBGLP0DKB5 382 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 ACADSBP45954 432 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 ADIGQ0VDE8 80 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 CLLU1OSQ5K130 101 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 CLEC20AQ6ZU45 233 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 CAND1Q86VP6 1230 aaKnown RBP14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 PPM1NQ8N819 430 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 BANPQ8N9N5 519 aa14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 SLC7A6OSQ96CW6 309 aaPredicted RBP14.31□□□□□ -0.12
PTCHD3-201ENST00000438700 RTP4Q96DX8 246 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms