RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 BMP8AQ7Z5Y6 402 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 CHSY1Q86X52 802 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 ETFBKMTQ8IXQ9 262 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 ZNF687Q8N1G0 1237 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 FBXL6Q8N531 539 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 CD101Q93033 1021 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 AZIN2Q96A70 460 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 P2RY13Q9BPV8 354 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 TKTL2Q9H0I9 626 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 FBRSL1Q9HCM7 1045 aaKnown RBP16.75■□□□□ 0.27
SNRPB-202ENST00000438552 RAPGEFL1Q9UHV5 662 aa16.75■□□□□ 0.27
SNRPB-202ENST00000438552 MRPS17Q9Y2R5 130 aaKnown RBP16.75■□□□□ 0.27
SNRPB-202ENST00000438552 TMEM191CA6NGB0 347 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 SOWAHDA6NJG2 315 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 FAM170BA6NMN3 283 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 PI15O43692 258 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 CACNG3O60359 315 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 ENDOD1O94919 500 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 CYBBP04839 570 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 CYP1A2P05177 515 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 DCNP07585 359 aaKnown RBP16.74■□□□□ 0.27
SNRPB-202ENST00000438552 AOC1P19801 751 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 TACR2P21452 398 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 HDAC4P56524 1084 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 AMPD2Q01433 879 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 MS4A13Q5J8X5 152 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 ASTLQ6HA08 431 aaPredicted RBP16.74■□□□□ 0.27
SNRPB-202ENST00000438552 FSTL4Q6MZW2 842 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 C1orf228Q6PIY5 440 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 STRADAQ7RTN6 431 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 SUGP1Q8IWZ8 645 aaKnown RBP16.74■□□□□ 0.27
SNRPB-202ENST00000438552 DDI1Q8WTU0 396 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 CENPIQ92674 756 aaPredicted RBP16.74■□□□□ 0.27
SNRPB-202ENST00000438552 CNPY3Q9BT09 278 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 NUP85Q9BW27 656 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 WDCPQ9H6R7 721 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 MRPL47Q9HD33 250 aaKnown RBP16.74■□□□□ 0.27
SNRPB-202ENST00000438552 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
SNRPB-202ENST00000438552 DNAJC17Q9NVM6 304 aaKnown RBP16.74■□□□□ 0.27
SNRPB-202ENST00000438552 ARHGEF38Q9NXL2 777 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 SLC12A6Q9UHW9 1150 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 SNX10Q9Y5X0 201 aa16.74■□□□□ 0.27
SNRPB-202ENST00000438552 GOLGA6L6A8MZA4 724 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 TRIM24O15164 1050 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 TBL1XO60907 577 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 TULP3O75386 442 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 PAGE1O75459 146 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 EGFP01133 1207 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 H2AFZP0C0S5 128 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 PSMA2P25787 234 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 HOXD9P28356 352 aaPredicted RBP16.73■□□□□ 0.27
SNRPB-202ENST00000438552 GALK1P51570 392 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 MPPE1Q53F39 396 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 TMEM196Q5HYL7 178 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 H2AFVQ71UI9 128 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 SFTPA1Q8IWL2 248 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 LGI2Q8N0V4 545 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 PHTF2Q8N3S3 785 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 TMEM105Q8N8V8 129 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 CTNNBL1Q8WYA6 563 aaPredicted RBP16.73■□□□□ 0.27
SNRPB-202ENST00000438552 EZH1Q92800 747 aaPredicted RBP16.73■□□□□ 0.27
SNRPB-202ENST00000438552 PRMT1Q99873 361 aaKnown RBP16.73■□□□□ 0.27
SNRPB-202ENST00000438552 DDX50Q9BQ39 737 aaKnown RBP16.73■□□□□ 0.27
SNRPB-202ENST00000438552 LRFN3Q9BTN0 628 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 SIT1Q9Y3P8 196 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 PAXBP1Q9Y5B6 917 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 HS3ST4Q9Y661 456 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 ZDBF2Q9HCK1 2354 aa16.73■□□□□ 0.27
SNRPB-202ENST00000438552 DOCK4Q8N1I0 1966 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 F5H5T6 163 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 TMEM253P0C7T8 217 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 EIF2DP41214 584 aaKnown RBP16.72■□□□□ 0.27
SNRPB-202ENST00000438552 RPS24P62847 133 aaKnown RBP16.72■□□□□ 0.27
SNRPB-202ENST00000438552 GRSF1Q12849 480 aaKnown RBP eCLIP16.72■□□□□ 0.274e-6■■□□□ 12
SNRPB-202ENST00000438552 CCINQ13939 588 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 CIR1Q86X95 450 aaPredicted RBP16.72■□□□□ 0.27
SNRPB-202ENST00000438552 TMEM139Q8IV31 216 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 CFAP52Q8N1V2 620 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 CCDC185Q8N715 623 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 HJURPQ8NCD3 748 aaPredicted RBP16.72■□□□□ 0.27
SNRPB-202ENST00000438552 BTBD6Q96KE9 485 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 XPO6Q96QU8 1125 aaKnown RBP16.72■□□□□ 0.27
SNRPB-202ENST00000438552 PNKPQ96T60 521 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 SIK2Q9H0K1 926 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 ARHGEF4Q9NR80 690 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 STIM2Q9P246 746 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 ANAPC7Q9UJX3 599 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 CLEC4EQ9ULY5 219 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 ATG2BQ96BY7 2078 aa16.72■□□□□ 0.27
SNRPB-202ENST00000438552 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.71■□□□□ 0.27
SNRPB-202ENST00000438552 KAT7O95251 611 aa16.71■□□□□ 0.27
SNRPB-202ENST00000438552 CHRNB1P11230 501 aa16.71■□□□□ 0.27
SNRPB-202ENST00000438552 DESP17661 470 aa16.71■□□□□ 0.27
SNRPB-202ENST00000438552 CYLC1P35663 651 aaPredicted RBP16.71■□□□□ 0.27
SNRPB-202ENST00000438552 PLA2G5P39877 138 aa16.71■□□□□ 0.27
SNRPB-202ENST00000438552 DGKGP49619 791 aa16.71■□□□□ 0.27
SNRPB-202ENST00000438552 IRAK1P51617 712 aa16.71■□□□□ 0.27
SNRPB-202ENST00000438552 CLCN5P51795 746 aa16.71■□□□□ 0.27
SNRPB-202ENST00000438552 FZD5Q13467 585 aa16.71■□□□□ 0.27
SNRPB-202ENST00000438552 AUHQ13825 339 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms