RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 SF3B1O75533 1304 aaKnown RBP eCLIP11.4□□□□□ -0.581e-6■■■■■ 50.3
ERGIC3-207ENST00000438317 COL4A4P53420 1690 aaPredicted RBP11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 TCRBV7S3A2A0A539 114 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 ARHGEF37A1IGU5 675 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 C9IYK1 514 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 H3BRJ5 948 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 PTGESO14684 152 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 TM9SF1O15321 606 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 ZNF623O75123 536 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 DGKIO75912 1065 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 TMEM63AO94886 807 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 ASMTLO95671 621 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 F9P00740 461 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 OAS1P00973 400 aaKnown RBP11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 MT-ND3P03897 115 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 FAM200BP0CF97 657 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 SKIP12755 728 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 MLNP12872 115 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 TAC1P20366 129 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 CA4P22748 312 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 HCAR3P49019 387 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 RAB27AP51159 221 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 NHLH1Q02575 133 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 PPARDQ03181 441 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 CA9Q16790 459 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 NBPF20Q3BBV1 942 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 RAB6CQ53S08 254 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 TRPM8Q7Z2W7 1104 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 BNIPLQ7Z465 357 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 SPATA21Q7Z572 469 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 OSTM1Q86WC4 334 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 CCNJLQ8IV13 435 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 FUKQ8N0W3 1084 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 DEFB106AQ8N104 65 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 GJD3Q8N144 294 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 VPS52Q8N1B4 723 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 SIX6OS1Q8N1H7 587 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 CSPG4P5Q96PW8 444 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 SLC2A13Q96QE2 648 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 NPY6RQ99463 290 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 PAFAH2Q99487 392 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 MED10Q9BTT4 135 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 PITPNM3Q9BZ71 974 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 RAB6CQ9H0N0 254 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 XAB2Q9HCS7 855 aaKnown RBP11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 FAM105AQ9NUU6 356 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 LMCD1Q9NZU5 365 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 KLHL14Q9P2G3 628 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 CDH9Q9ULB4 789 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 STARD13Q9Y3M8 1113 aa11.4□□□□□ -0.58
ERGIC3-207ENST00000438317 TDRD15B5MCY1 1934 aaKnown RBP11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 LCHNA4D1U4 455 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 TYROBPO43914 113 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 DNAJC8O75937 253 aaPredicted RBP11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 PCSK1P29120 753 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 RFC2P35250 354 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 SULT1E1P49888 294 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 WDR4P57081 412 aaKnown RBP11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 YWHAGP61981 247 aaKnown RBP eCLIP11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 PDK1Q15118 436 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 PDK4Q16654 411 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 WSCD1Q658N2 575 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 RNF43Q68DV7 783 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 HEATR6Q6AI08 1181 aaKnown RBP11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 KCNT2Q6UVM3 1135 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 DSTYKQ6XUX3 929 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 PAQR9Q6ZVX9 377 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 SERINC5Q86VE9 423 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 METTL23Q86XA0 190 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 GDAP1Q8TB36 358 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 LRRC8CQ8TDW0 803 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 DCAKDQ8WVC6 231 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 TFB1MQ8WVM0 346 aaKnown RBP11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 SLC44A1Q8WWI5 657 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 WNT8BQ93098 351 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 FAM149B1Q96BN6 582 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 PGBD4Q96DM1 585 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 QKIQ96PU8 341 aaKnown RBP eCLIP11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 KCTD15Q96SI1 283 aaPredicted RBP11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 LPIN3Q9BQK8 851 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 BRD8Q9H0E9 1235 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 VPS11Q9H270 941 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 ETNK1Q9HBU6 452 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 POPDC2Q9HBU9 364 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 CNGB3Q9NQW8 809 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 FGFR1OP2Q9NVK5 253 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 DDX43Q9NXZ2 648 aaKnown RBP11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 PRKAG3Q9UGI9 489 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 ZNF180Q9UJW8 692 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 SQORQ9Y6N5 450 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 WDFY4Q6ZS81 3184 aa11.39□□□□□ -0.59
ERGIC3-207ENST00000438317 CFAP73A6NFT4 308 aa11.38□□□□□ -0.59
ERGIC3-207ENST00000438317 NCAM2O15394 837 aa11.38□□□□□ -0.59
ERGIC3-207ENST00000438317 SPAG7O75391 227 aa11.38□□□□□ -0.59
ERGIC3-207ENST00000438317 INHBAP08476 426 aa11.38□□□□□ -0.59
ERGIC3-207ENST00000438317 IL9P15248 144 aa11.38□□□□□ -0.59
ERGIC3-207ENST00000438317 KRT4P19013 534 aa11.38□□□□□ -0.59
ERGIC3-207ENST00000438317 AMPD1P23109 780 aa11.38□□□□□ -0.59
ERGIC3-207ENST00000438317 ALDH3A1P30838 453 aa11.38□□□□□ -0.59
ERGIC3-207ENST00000438317 SCTRP47872 440 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms