RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 ADIGQ0VDE8 80 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 AP1B1Q10567 949 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 BST1Q10588 318 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 WASHC5Q12768 1159 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 STX3Q13277 289 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 BMPR2Q13873 1038 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 CHI3L2Q15782 390 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 INSCQ1MX18 579 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 ACCSLQ4AC99 568 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 DCAF6Q58WW2 860 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 INTS6LQ5JSJ4 861 aaKnown RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 SPANXN3Q5MJ09 141 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 CASC4Q6P4E1 433 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 TRMT10BQ6PF06 316 aaKnown RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 CDHR3Q6ZTQ4 885 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 OSTM1Q86WC4 334 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 FAM131BQ86XD5 332 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 TMEM86AQ8N2M4 240 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 MPP5Q8N3R9 675 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 SMC1BQ8NDV3 1235 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 N4BP2L2Q92802 583 aaPredicted RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 NTAN1Q96AB6 310 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 MED10Q9BTT4 135 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 SLC13A1Q9BZW2 595 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 AP5M1Q9H0R1 490 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 MMADHCQ9H3L0 296 aaPredicted RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 STN1Q9H668 368 aaKnown RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 PCMTD2Q9NV79 361 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 SLC38A7Q9NVC3 462 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 ARL8BQ9NVJ2 186 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.73□□□□□ -0.69
CD44-210ENST00000434472 KLK14Q9P0G3 267 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 DCDC2Q9UHG0 476 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 ADAM28Q9UKQ2 775 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 Q9Y3F1 56 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 IPPQ9Y573 584 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 PDCD11Q14690 1871 aaKnown RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 C17orf102A2RUQ5 167 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 C9IYK1 514 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 M0QYT0 321 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 FCHO1O14526 889 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 CYB561D2O14569 222 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 MTSS1O43312 755 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 HCRTO43612 131 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 MFSD11O43934 449 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 UGT1A9O60656 530 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 SNNO75324 88 aaPredicted RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 POLBP06746 335 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 FAM200BP0CF97 657 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 TKTP29401 623 aaKnown RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 LHX1P48742 406 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 GJA9P57773 515 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 FRG1Q14331 258 aaKnown RBP10.73□□□□□ -0.69
CD44-210ENST00000434472 MROH9Q5TGP6 573 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 PACS1Q6VY07 963 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 TLK2Q86UE8 772 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 PYROXD2Q8N2H3 581 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 MAB21L3Q8N8X9 362 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 PPP1R14CQ8TAE6 165 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 MCUR1Q96AQ8 359 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 P2RY11Q96G91 374 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 NUDCD1Q96RS6 583 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 DCLRE1BQ9H816 532 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 UGT1A7Q9HAW7 530 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 UGT1A10Q9HAW8 530 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 UGT1A8Q9HAW9 530 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 XPNPEP3Q9NQH7 507 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 THAP1Q9NVV9 213 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 SORCS3Q9UPU3 1222 aa10.73□□□□□ -0.69
CD44-210ENST00000434472 FAM237BA0A1B0GVD1 139 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 GLTPD2A6NH11 291 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 ERI2A8K979 691 aaKnown RBP10.72□□□□□ -0.69
CD44-210ENST00000434472 AP3B1O00203 1094 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 GABRDO14764 452 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 DCLK1O15075 740 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 GSC2O15499 205 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 LUC7L3O95232 432 aaKnown RBP10.72□□□□□ -0.69
CD44-210ENST00000434472 F9P00740 461 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 MYL3P08590 195 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 GNAZP19086 355 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 IBSPP21815 317 aaPredicted RBP10.72□□□□□ -0.69
CD44-210ENST00000434472 MGAT1P26572 445 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 CLNS1AP54105 237 aaKnown RBP10.72□□□□□ -0.69
CD44-210ENST00000434472 SOX4Q06945 474 aaPredicted RBP10.72□□□□□ -0.69
CD44-210ENST00000434472 SCAPQ12770 1279 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 DPYSQ14117 519 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 ZRSR2Q15696 482 aaKnown RBP10.72□□□□□ -0.69
CD44-210ENST00000434472 ARL13BQ3SXY8 428 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 TEX44Q53QW1 395 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 CMPK2Q5EBM0 449 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 GRTP1Q5TC63 336 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 RFX8Q6ZV50 586 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 PDCD7Q8N8D1 485 aaKnown RBP10.72□□□□□ -0.69
CD44-210ENST00000434472 SMG8Q8ND04 991 aaKnown RBP10.72□□□□□ -0.69
CD44-210ENST00000434472 CCNYQ8ND76 341 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 LGMNQ99538 433 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 CADM1Q9BY67 442 aaKnown RBP10.72□□□□□ -0.69
CD44-210ENST00000434472 CXorf56Q9H5V9 222 aa10.72□□□□□ -0.69
CD44-210ENST00000434472 LRRC40Q9H9A6 602 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms