RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CYBBP04839 570 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 COL4A2P08572 1712 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 GDI1P31150 447 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 HTR7P34969 479 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 ADRA1BP35368 520 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 NRG1Q02297 640 aaPredicted RBP11.39□□□□□ -0.59
CHD4-202ENST00000430771 GRM2Q14416 872 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 KRT81Q14533 505 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 SMTNL2Q2TAL5 461 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 RAB6CQ53S08 254 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 MS4A13Q5J8X5 152 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 RABGAP1LQ5R372 815 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 ADGRF1Q5T601 910 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 ERMARDQ5T6L9 678 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 PIK3R6Q5UE93 754 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 DAB2IPQ5VWQ8 1189 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 LRRC31Q6UY01 552 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 FAM217AQ8IXS0 508 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 CPA6Q8N4T0 437 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 ARFGAP1Q8N6T3 406 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 UBL4BQ8N7F7 174 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 HJURPQ8NCD3 748 aaPredicted RBP11.39□□□□□ -0.59
CHD4-202ENST00000430771 IRF7Q92985 503 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 WBP2Q969T9 261 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 PEBP4Q96S96 227 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 RAB6CQ9H0N0 254 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 OSBPL2Q9H1P3 480 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 GOLPH3Q9H4A6 298 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 DHX35Q9H5Z1 703 aaKnown RBP11.39□□□□□ -0.59
CHD4-202ENST00000430771 BRD9Q9H8M2 597 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 ZWILCHQ9H900 591 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 KCNK12Q9HB15 430 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.39□□□□□ -0.59
CHD4-202ENST00000430771 DDX56Q9NY93 547 aaKnown RBP11.39□□□□□ -0.59
CHD4-202ENST00000430771 HS3ST4Q9Y661 456 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 ALG6Q9Y672 507 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 WNT6Q9Y6F9 365 aa11.39□□□□□ -0.59
CHD4-202ENST00000430771 USP27XA6NNY8 438 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 SCAMP3O14828 347 aaKnown RBP11.38□□□□□ -0.59
CHD4-202ENST00000430771 KRT1P04264 644 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 TACR2P21452 398 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 CTNNA2P26232 953 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 IL1R2P27930 398 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 CTNNA1P35221 906 aaKnown RBP11.38□□□□□ -0.59
CHD4-202ENST00000430771 ARL4AP40617 200 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 TAS2R40P59535 323 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 TPI1P60174 286 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 PFKPQ01813 784 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 NR1H3Q13133 447 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 DPYSL2Q16555 572 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 EML3Q32P44 896 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 FAM133BQ5BKY9 247 aaKnown RBP11.38□□□□□ -0.59
CHD4-202ENST00000430771 RAP1GAP2Q684P5 730 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 NADSYN1Q6IA69 706 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 MAP7D3Q8IWC1 876 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 ZNF557Q8N988 423 aaPredicted RBP11.38□□□□□ -0.59
CHD4-202ENST00000430771 CSGALNACT1Q8TDX6 532 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 HSPH1Q92598 858 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 DNASE1L2Q92874 299 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 TBC1D31Q96DN5 1066 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 C1orf74Q96LT6 269 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 SIK2Q9H0K1 926 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 LIMD1Q9UGP4 676 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 XPO7Q9UIA9 1087 aaKnown RBP11.38□□□□□ -0.59
CHD4-202ENST00000430771 TICRRQ7Z2Z1 1910 aa11.38□□□□□ -0.59
CHD4-202ENST00000430771 KIAA1549LQ6ZVL6 1849 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 C19orf67A6NJJ6 358 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 E9PAM4 449 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 H3BRJ5 948 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 FGF10O15520 208 aaPredicted RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 CREB3O43889 395 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 FTCDO95954 541 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 CYP17A1P05093 508 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 ASGR2P07307 311 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 RARAP10276 462 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 ADH5P11766 374 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 TNNT1P13805 278 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 TCF4P15884 667 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 SLC6A4P31645 630 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 L1CAMP32004 1257 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 GGCXP38435 758 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 VCPP55072 806 aaKnown RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 CDH6P55285 790 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 GAD2Q05329 585 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 TDGQ13569 410 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 PDK2Q15119 407 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 MPPE1Q53F39 396 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 PPP6R3Q5H9R7 873 aaPredicted RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 TJAP1Q5JTD0 557 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 KCNT1Q5JUK3 1230 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 CYP4V2Q6ZWL3 525 aaPredicted RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 NT5DC3Q86UY8 548 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 VSIG1Q86XK7 387 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 CPNE8Q86YQ8 564 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 CCDC117Q8IWD4 279 aaPredicted RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHD4-202ENST00000430771 KATNAL2Q8IYT4 538 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 LGI2Q8N0V4 545 aa11.37□□□□□ -0.59
CHD4-202ENST00000430771 ST13P5Q8NFI4 369 aaPredicted RBP11.37□□□□□ -0.59
CHD4-202ENST00000430771 RSAD2Q8WXG1 361 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms