RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ARID3BQ8IVW6 561 aaPredicted RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 MAP7D3Q8IWC1 876 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 RCOR2Q8IZ40 523 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 PYROXD2Q8N2H3 581 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 CELF5Q8N6W0 485 aaKnown RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 TDRD5Q8NAT2 981 aaKnown RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 ST13P5Q8NFI4 369 aaPredicted RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 EXD1Q8NHP7 514 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 MAFAQ8NHW3 353 aaPredicted RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 SUSD6Q92537 303 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 RAPGEF5Q92565 580 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 WBP2Q969T9 261 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 ASB16Q96NS5 453 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 HAPLN3Q96S86 360 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 MYADMQ96S97 322 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 OSBPL9Q96SU4 736 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 DDX50Q9BQ39 737 aaKnown RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 CARD9Q9H257 536 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 KIF9Q9HAQ2 790 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 PCDH18Q9HCL0 1135 aa8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 AGO1Q9UL18 857 aaKnown RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 PRRC2BQ5JSZ5 2229 aaKnown RBP8.19□□□□□ -1.1
HMGA1P4-201ENST00000428643 GOLGA6L7A0A1B0GV03 622 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 E2F8A0AVK6 867 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 GRXCR2A6NFK2 248 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 F5H5T6 163 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 I6L893 689 aaPredicted RBP8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 DAPK3O43293 454 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 ACSL4O60488 711 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 SRGAP2O75044 1071 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 URI1O94763 535 aaPredicted RBP8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 LATS1O95835 1130 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 CD48P09326 243 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 PYGMP11217 842 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 GOT1P17174 413 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 TACR2P21452 398 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 KDELR1P24390 212 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 L1CAMP32004 1257 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 VCPP55072 806 aaKnown RBP8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 DYNLT1P63172 113 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZXDBP98169 803 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 MMRN1Q13201 1228 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 DPYSL3Q14195 570 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZNF77Q15935 545 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 TFDP3Q5H9I0 405 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 MS4A13Q5J8X5 152 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 RABGAP1LQ5R372 815 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 PAPD7Q5XG87 772 aaKnown RBP8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 KAZNQ674X7 775 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 NADSYN1Q6IA69 706 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 AADACL2Q6P093 401 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 MFSD7Q6UXD7 560 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 SPOCD1Q6ZMY3 1216 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 RFX8Q6ZV50 586 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 RFX6Q8HWS3 928 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 BBS7Q8IWZ6 715 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 LGI2Q8N0V4 545 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 RIN3Q8TB24 985 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 ADAMTS19Q8TE59 1207 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 COG1Q8WTW3 980 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 TBC1D31Q96DN5 1066 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 CAPZA3Q96KX2 299 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 RPRD1AQ96P16 312 aaPredicted RBP8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 CSPG4P5Q96PW8 444 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZNF670Q9BS34 389 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 HEMGNQ9BXL5 484 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 MAGEB5Q9BZ81 275 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 OR12D3Q9UGF7 316 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 VANGL2Q9ULK5 521 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZNF510Q9Y2H8 683 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 HS3ST4Q9Y661 456 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 SAR1BQ9Y6B6 198 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZFP37Q9Y6Q3 630 aaPredicted RBP8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 MYH10P35580 1976 aa8.18□□□□□ -1.1
HMGA1P4-201ENST00000428643 hCG_1818297A0A087WSY0 165 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 TYW5A2RUC4 315 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 C3orf70A6NLC5 250 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 HEPACAM2A8MVW5 462 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 E9PAM4 449 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FAM72CH0Y354 149 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 PGRMC1O00264 195 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 TRDMT1O14717 391 aaKnown RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 SLC9A3R1O14745 358 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 ZNF185O15231 689 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FGF10O15520 208 aaPredicted RBP8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 MBTPS2O43462 519 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 TSPAN3O60637 253 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 LRIG2O94898 1065 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FGGP02679 453 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 LAMP2P13473 410 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 FCARP24071 287 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 EPHB2P29323 1055 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 WEE1P30291 646 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 SLC6A4P31645 630 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 PTPN7P35236 360 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 CDKN2BP42772 138 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 IFNAR2P48551 515 aa8.17□□□□□ -1.1
HMGA1P4-201ENST00000428643 ARSEP51690 589 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms