RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 SERPINA13PQ6UXR4 307 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 CHST9Q7L1S5 443 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 STK32AQ8WU08 396 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 CYB5D2Q8WUJ1 264 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 MYEOVQ96EZ4 313 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 MKRN2Q9H000 416 aaKnown RBP19.13■□□□□ 0.65
PSPC1-202ENST00000427943 PRDM16Q9HAZ2 1276 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 STIM2Q9P246 746 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 GGA2Q9UJY4 613 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 DNAJC12Q9UKB3 198 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 TLR6Q9Y2C9 796 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 PCDH15Q96QU1 1955 aa19.13■□□□□ 0.65
PSPC1-202ENST00000427943 C4orf47A7E2U8 309 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 NPC1O15118 1278 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 EPHX1P07099 455 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 PABPC1P11940 636 aaKnown RBP19.12■□□□□ 0.65
PSPC1-202ENST00000427943 HLA-EP13747 358 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 PITX1P78337 314 aaPredicted RBP19.12■□□□□ 0.65
PSPC1-202ENST00000427943 MIIPQ5JXC2 388 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 TMEM110Q86TL2 294 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 SYT12Q8IV01 421 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 ZNF366Q8N895 744 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 WFIKKN2Q8TEU8 576 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 DDX1Q92499 740 aaKnown RBP19.12■□□□□ 0.65
PSPC1-202ENST00000427943 HSPA12BQ96MM6 686 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 CPXM1Q96SM3 734 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 TUBGCP2Q9BSJ2 902 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 NUCKS1Q9H1E3 243 aaKnown RBP19.12■□□□□ 0.65
PSPC1-202ENST00000427943 NDST4Q9H3R1 872 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 LMBRD1Q9NUN5 540 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 DACH1Q9UI36 760 aa19.12■□□□□ 0.65
PSPC1-202ENST00000427943 PES1O00541 588 aaKnown RBP19.11■□□□□ 0.65
PSPC1-202ENST00000427943 TM4SF5O14894 197 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 SYNCRIPO60506 623 aaKnown RBP19.11■□□□□ 0.65
PSPC1-202ENST00000427943 ERCC5P28715 1186 aaPredicted RBP19.11■□□□□ 0.65
PSPC1-202ENST00000427943 CD70P32970 193 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 ZNF33AQ06730 810 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 NNTQ13423 1086 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 TAF5Q15542 800 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 VWA3BQ502W6 1294 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 FNDC3BQ53EP0 1204 aaKnown RBP19.11■□□□□ 0.65
PSPC1-202ENST00000427943 SPDYCQ5MJ68 293 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 ADIPOR2Q86V24 386 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 SLC41A1Q8IVJ1 513 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 AHI1Q8N157 1196 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 WDTC1Q8N5D0 677 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.11■□□□□ 0.65
PSPC1-202ENST00000427943 C1orf131Q8NDD1 294 aaKnown RBP19.11■□□□□ 0.65
PSPC1-202ENST00000427943 SLC39A13Q96H72 371 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 POPDC2Q9HBU9 364 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 TMEM9BQ9NQ34 198 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 FSCN3Q9NQT6 498 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 EVLQ9UI08 416 aaPredicted RBP19.11■□□□□ 0.65
PSPC1-202ENST00000427943 XPO7Q9UIA9 1087 aaKnown RBP19.11■□□□□ 0.65
PSPC1-202ENST00000427943 PILRBQ9UKJ0 227 aa19.11■□□□□ 0.65
PSPC1-202ENST00000427943 ASCC3Q8N3C0 2202 aaKnown RBP19.1■□□□□ 0.65
PSPC1-202ENST00000427943 NUMA1Q14980 2115 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 KCNJ18B7U540 433 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 IRAK2O43187 625 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 NDUFS2O75306 463 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 CFIP05156 583 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 ADRB1P08588 477 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 COPAP53621 1224 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 RPS24P62847 133 aaKnown RBP19.1■□□□□ 0.65
PSPC1-202ENST00000427943 YWHAZP63104 245 aaKnown RBP19.1■□□□□ 0.65
PSPC1-202ENST00000427943 KCNJ12Q14500 433 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 PEAR1Q5VY43 1037 aaPredicted RBP19.1■□□□□ 0.65
PSPC1-202ENST00000427943 MBLAC2Q68D91 279 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 TMPRSS6Q8IU80 811 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 MFN1Q8IWA4 741 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 HJURPQ8NCD3 748 aaPredicted RBP19.1■□□□□ 0.65
PSPC1-202ENST00000427943 AZIN2Q96A70 460 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 TRIM62Q9BVG3 475 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 NUSAP1Q9BXS6 441 aaKnown RBP19.1■□□□□ 0.65
PSPC1-202ENST00000427943 PLCB1Q9NQ66 1216 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 SAMSN1Q9NSI8 373 aaKnown RBP19.1■□□□□ 0.65
PSPC1-202ENST00000427943 USP36Q9P275 1121 aaKnown RBP19.1■□□□□ 0.65
PSPC1-202ENST00000427943 PCDHGC3Q9UN70 934 aa19.1■□□□□ 0.65
PSPC1-202ENST00000427943 TYW5A2RUC4 315 aaKnown RBP19.09■□□□□ 0.65
PSPC1-202ENST00000427943 FOXN3O00409 490 aaPredicted RBP19.09■□□□□ 0.65
PSPC1-202ENST00000427943 CDX4O14627 284 aaPredicted RBP19.09■□□□□ 0.65
PSPC1-202ENST00000427943 TIMM44O43615 452 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 TRUB2O95900 331 aaKnown RBP19.09■□□□□ 0.65
PSPC1-202ENST00000427943 APOEP02649 317 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 MAPK8P45983 427 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 PTK2Q05397 1052 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 RAPGEF1Q13905 1077 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 E2F5Q15329 346 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 ZC3H12AQ5D1E8 599 aaKnown RBP19.09■□□□□ 0.65
PSPC1-202ENST00000427943 MPP7Q5T2T1 576 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 CLEC17AQ6ZS10 378 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 BEND5Q7L4P6 421 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 KIAA0907Q7Z7F0 614 aaPredicted RBP19.09■□□□□ 0.65
PSPC1-202ENST00000427943 SLC47A2Q86VL8 602 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 CFAP52Q8N1V2 620 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 CARNMT1Q8N4J0 409 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 PRCCQ92733 491 aaPredicted RBP19.09■□□□□ 0.65
PSPC1-202ENST00000427943 SIPA1Q96FS4 1042 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 PPP1R13BQ96KQ4 1090 aa19.09■□□□□ 0.65
PSPC1-202ENST00000427943 DDX50Q9BQ39 737 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms