RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 FCRL2Q96LA5 508 aaPredicted RBP21.45■■□□□ 1.02
HSPG2-205ENST00000427897 SPAG5Q96R06 1193 aa21.45■■□□□ 1.02
HSPG2-205ENST00000427897 GABRG3Q99928 467 aa21.45■■□□□ 1.02
HSPG2-205ENST00000427897 VPS45Q9NRW7 570 aa21.45■■□□□ 1.02
HSPG2-205ENST00000427897 FAM207AQ9NSI2 230 aaPredicted RBP21.45■■□□□ 1.02
HSPG2-205ENST00000427897 ABCB8Q9NUT2 735 aa21.45■■□□□ 1.02
HSPG2-205ENST00000427897 ASNSD1Q9NWL6 643 aa21.45■■□□□ 1.02
HSPG2-205ENST00000427897 DDIT4Q9NX09 232 aa21.45■■□□□ 1.02
HSPG2-205ENST00000427897 THAP10Q9P2Z0 257 aaPredicted RBP21.45■■□□□ 1.02
HSPG2-205ENST00000427897 HCN2Q9UL51 889 aa21.45■■□□□ 1.02
HSPG2-205ENST00000427897 A0A1W2PQF6 199 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 CAVIN2O95810 425 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 ZNF806P0C7X5 589 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 SLC2A3P11169 496 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 CHRM1P11229 460 aaPredicted RBP21.44■■□□□ 1.02
HSPG2-205ENST00000427897 POLR2EP19388 210 aaKnown RBP21.44■■□□□ 1.02
HSPG2-205ENST00000427897 TGM1P22735 817 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 COPB1P53618 953 aaKnown RBP21.44■■□□□ 1.02
HSPG2-205ENST00000427897 RNASE9P60153 205 aaKnown RBP21.44■■□□□ 1.02
HSPG2-205ENST00000427897 POLR2FP61218 127 aaKnown RBP21.44■■□□□ 1.02
HSPG2-205ENST00000427897 ZNF234Q14588 700 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 KLHL40Q2TBA0 621 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 FNDC3BQ53EP0 1204 aaKnown RBP21.44■■□□□ 1.02
HSPG2-205ENST00000427897 ZC3H12AQ5D1E8 599 aaKnown RBP21.44■■□□□ 1.02
HSPG2-205ENST00000427897 PMS2CLQ68D20 193 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 KIAA1211LQ6NV74 962 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 FAM183BPQ6ZVS7 135 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 DGLUCYQ7Z3D6 616 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 CYP2U1Q7Z449 544 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 ERICH1Q86X53 443 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 ZDHHC17Q8IUH5 632 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 MFN1Q8IWA4 741 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 AHI1Q8N157 1196 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 CARNMT1Q8N4J0 409 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 NEK11Q8NG66 645 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 OLIG1Q8TAK6 271 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 P2RY11Q96G91 374 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 BTN2A3PQ96KV6 586 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 NLRC4Q9NPP4 1024 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 CALCOCO1Q9P1Z2 691 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 GGA2Q9UJY4 613 aa21.44■■□□□ 1.02
HSPG2-205ENST00000427897 RIF1Q5UIP0 2472 aaKnown RBP21.43■■□□□ 1.02
HSPG2-205ENST00000427897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 H0Y626 953 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 ERBB2P04626 1255 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 ATP5BP06576 529 aaKnown RBP21.43■■□□□ 1.02
HSPG2-205ENST00000427897 PABPC1P11940 636 aaKnown RBP21.43■■□□□ 1.02
HSPG2-205ENST00000427897 BCKDHBP21953 392 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 SLC6A4P31645 630 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 SLC6A3Q01959 620 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 UBXN1Q04323 297 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 TYRO3Q06418 890 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 NME3Q13232 169 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 SF3A2Q15428 464 aaKnown RBP21.43■■□□□ 1.02
HSPG2-205ENST00000427897 CHSY1Q86X52 802 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 TMEFF1Q8IYR6 380 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 LGI2Q8N0V4 545 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 SORCS1Q8WY21 1168 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 C18orf8Q96DM3 657 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 SLC39A13Q96H72 371 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 CFAP54Q96N23 3096 aa21.43■■□□□ 1.02
HSPG2-205ENST00000427897 F8VZ95 297 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 AP5Z1O43299 807 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 NDUFS2O75306 463 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 GFPT2O94808 682 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 EPHX1P07099 455 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 ACADMP11310 421 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 NDUFV2P19404 249 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 HLA-FP30511 346 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 CCR1P32246 355 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 IL12RB1P42701 662 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 SGSHP51688 502 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 RPL6Q02878 288 aaKnown RBP21.42■■□□□ 1.02
HSPG2-205ENST00000427897 CDH18Q13634 790 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 FAM133BQ5BKY9 247 aaKnown RBP21.42■■□□□ 1.02
HSPG2-205ENST00000427897 RAP1GAP2Q684P5 730 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 NADSYN1Q6IA69 706 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 CAVIN1Q6NZI2 390 aaKnown RBP21.42■■□□□ 1.02
HSPG2-205ENST00000427897 SND1Q7KZF4 910 aaKnown RBP eCLIP21.42■■□□□ 1.021e-12■■□□□ 13.5
HSPG2-205ENST00000427897 CFAP52Q8N1V2 620 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 AOPEPQ8N6M6 819 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 NETO1Q8TDF5 533 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 MYO18AQ92614 2054 aaKnown RBP21.42■■□□□ 1.02
HSPG2-205ENST00000427897 PIGKQ92643 395 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 NAA15Q9BXJ9 866 aaKnown RBP21.42■■□□□ 1.02
HSPG2-205ENST00000427897 NUCKS1Q9H1E3 243 aaKnown RBP21.42■■□□□ 1.02
HSPG2-205ENST00000427897 PRDM16Q9HAZ2 1276 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 LIMA1Q9UHB6 759 aaKnown RBP21.42■■□□□ 1.02
HSPG2-205ENST00000427897 DAAM1Q9Y4D1 1078 aa21.42■■□□□ 1.02
HSPG2-205ENST00000427897 THADAQ6YHU6 1953 aa21.41■■□□□ 1.02
HSPG2-205ENST00000427897 FRYLO94915 3013 aa21.41■■□□□ 1.02
HSPG2-205ENST00000427897 FAM170AA1A519 330 aa21.41■■□□□ 1.02
HSPG2-205ENST00000427897 BCLAF3A2AJT9 711 aaKnown RBP21.41■■□□□ 1.02
HSPG2-205ENST00000427897 SMTNL1A8MU46 457 aa21.41■■□□□ 1.02
HSPG2-205ENST00000427897 F5H5T6 163 aa21.41■■□□□ 1.02
HSPG2-205ENST00000427897 MOCS3O95396 460 aa21.41■■□□□ 1.02
HSPG2-205ENST00000427897 NOS2P35228 1153 aa21.41■■□□□ 1.02
HSPG2-205ENST00000427897 STAT1P42224 750 aa21.41■■□□□ 1.02
HSPG2-205ENST00000427897 KLK7P49862 253 aa21.41■■□□□ 1.02
HSPG2-205ENST00000427897 ST8SIA6P61647 398 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms