RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 NDUFV2P19404 249 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 PRKCHP24723 683 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 CDH5P33151 784 aaPredicted RBP13.24□□□□□ -0.29
GPC1-204ENST00000426280 P2RY2P41231 377 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 ID4P47928 161 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 IRAK1P51617 712 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 RING1Q06587 406 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 ENPP2Q13822 863 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 ZNF234Q14588 700 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 HSF5Q4G112 596 aaPredicted RBP13.24□□□□□ -0.29
GPC1-204ENST00000426280 RAB6CQ53S08 254 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 DCAF6Q58WW2 860 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 BEND5Q7L4P6 421 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 ADIPOR2Q86V24 386 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 ZNF366Q8N895 744 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 ANKRD20A12PQ8NF67 263 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 CCDC26Q8TAB7 109 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 KCNV2Q8TDN2 545 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 FAM81BQ96LP2 452 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 PCDHB18PQ96TA0 734 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 STK33Q9BYT3 514 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 RAB6CQ9H0N0 254 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 POPDC2Q9HBU9 364 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 POLMQ9NP87 494 aaPredicted RBP13.24□□□□□ -0.29
GPC1-204ENST00000426280 NLRC4Q9NPP4 1024 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 FAM207AQ9NSI2 230 aaPredicted RBP13.24□□□□□ -0.29
GPC1-204ENST00000426280 ABCB8Q9NUT2 735 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 ELOVL2Q9NXB9 296 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 NOCTQ9UK39 431 aaKnown RBP13.24□□□□□ -0.29
GPC1-204ENST00000426280 INTS6Q9UL03 887 aaKnown RBP13.24□□□□□ -0.29
GPC1-204ENST00000426280 TLR6Q9Y2C9 796 aa13.24□□□□□ -0.29
GPC1-204ENST00000426280 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
GPC1-204ENST00000426280 GVINP1Q7Z2Y8 2422 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 LGALS16A8MUM7 142 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 PATE3B3GLJ2 98 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 F8VZ95 297 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 GOLGA6L19H0YKK7 550 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 IRAK2O43187 625 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 CAVIN2O95810 425 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 CYBBP04839 570 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 TPM2P07951 284 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 GBP1P32455 592 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 KRT9P35527 623 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 GGCXP38435 758 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 ATXN1P54253 815 aaKnown RBP13.23□□□□□ -0.29
GPC1-204ENST00000426280 JAM2P57087 298 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 POLR2FP61218 127 aaKnown RBP13.23□□□□□ -0.29
GPC1-204ENST00000426280 SLC6A3Q01959 620 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 SYCP1Q15431 976 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 CSRP2Q16527 193 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 PTPRNQ16849 979 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 FUT11Q495W5 492 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 USP39Q53GS9 565 aaKnown RBP13.23□□□□□ -0.29
GPC1-204ENST00000426280 MS4A13Q5J8X5 152 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 PLA2G2CQ5R387 149 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 ARTNQ5T4W7 220 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 RAP1GAP2Q684P5 730 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 PMS2CLQ68D20 193 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 PRR23CQ6ZRP0 262 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 PHLDB2Q86SQ0 1253 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 TMEFF1Q8IYR6 380 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 PGBD3Q8N328 593 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 CPA5Q8WXQ8 436 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 AZIN2Q96A70 460 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 NAP1L5Q96NT1 182 aaPredicted RBP13.23□□□□□ -0.29
GPC1-204ENST00000426280 PRMT1Q99873 361 aaKnown RBP13.23□□□□□ -0.29
GPC1-204ENST00000426280 MKRN2Q9H000 416 aaKnown RBP13.23□□□□□ -0.29
GPC1-204ENST00000426280 TMPRSS4Q9NRS4 437 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 TMEM74BQ9NUR3 256 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 DLL3Q9NYJ7 618 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 BCCIPQ9P287 314 aaKnown RBP eCLIP13.23□□□□□ -0.29
GPC1-204ENST00000426280 SNX10Q9Y5X0 201 aa13.23□□□□□ -0.29
GPC1-204ENST00000426280 ABCA7Q8IZY2 2146 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 DMXL1Q9Y485 3027 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 KCNU1A8MYU2 1149 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 CAPN9O14815 690 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 LATS1O95835 1130 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 PTGER3P43115 390 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 RNASE9P60153 205 aaKnown RBP13.22□□□□□ -0.29
GPC1-204ENST00000426280 FANCCQ00597 558 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 UBXN1Q04323 297 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 LMAN2Q12907 356 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 FKBP15Q5T1M5 1219 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 NUGGCQ68CJ6 796 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 CHST9Q7L1S5 443 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 ARMCX6Q7L4S7 300 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 ANKS1BQ7Z6G8 1248 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 C14orf80Q86SX3 495 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 CIR1Q86X95 450 aaPredicted RBP13.22□□□□□ -0.29
GPC1-204ENST00000426280 GAS2L3Q86XJ1 694 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 XYLT1Q86Y38 959 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 UNC45BQ8IWX7 931 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 LGI2Q8N0V4 545 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 EPS8L1Q8TE68 723 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 GOLGA1Q92805 767 aa13.22□□□□□ -0.29
GPC1-204ENST00000426280 MYO19Q96H55 970 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms