RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 DCAF6Q58WW2 860 aa19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 OR6B2Q6IFH4 312 aa19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 SDE2Q6IQ49 451 aa19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 PRR23CQ6ZRP0 262 aa19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 TRIM62Q9BVG3 475 aa19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 IRX2Q9BZI1 471 aaPredicted RBP19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 SLC6A17Q9H1V8 727 aa19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 SMOC1Q9H4F8 434 aa19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 CALCOCO1Q9P1Z2 691 aa19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 BCCIPQ9P287 314 aaKnown RBP eCLIP19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 PCDHGA5Q9Y5G8 931 aa19.04■□□□□ 0.64
SMARCAL1-205ENST00000425815 EML5Q05BV3 1969 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 KCNU1A8MYU2 1149 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 TIMM44O43615 452 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 GBP1P32455 592 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 CD70P32970 193 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 GABRB2P47870 512 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 JAM2P57087 298 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 RPS24P62847 133 aaKnown RBP19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 SLC6A3Q01959 620 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 ZNF234Q14588 700 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 SF3A2Q15428 464 aaKnown RBP19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 ELF2Q15723 593 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 MS4A13Q5J8X5 152 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 EFHC1Q5JVL4 640 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 TAF3Q5VWG9 929 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 PGBD3Q8N328 593 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 ADAM33Q9BZ11 813 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 RXFP3Q9NSD7 469 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 ABCB8Q9NUT2 735 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 SPTBN4Q9H254 2564 aa19.03■□□□□ 0.64
SMARCAL1-205ENST00000425815 FAM170AA1A519 330 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 BCLAF3A2AJT9 711 aaKnown RBP19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 PRR5-ARHGAP8B1AHC4 643 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 NPC1O15118 1278 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 HSF2BPO75031 334 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 MOCS2O96007 188 aaPredicted RBP19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 MMEP08473 750 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 ATXN1P54253 815 aaKnown RBP19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 POLR2FP61218 127 aaKnown RBP19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 ARHGAP8P85298 464 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 EIF4HQ15056 248 aaKnown RBP19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 PTPRNQ16849 979 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 FUT11Q495W5 492 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 SLC26A9Q7LBE3 791 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 C11orf74Q86VG3 221 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 TMEM35BQ8NCS4 154 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 ZNF397Q8NF99 534 aaPredicted RBP19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 EPS8L1Q8TE68 723 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 MRGPRX1Q96LB2 322 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 NOX5Q96PH1 765 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 CIPCQ9C0C6 399 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 CD93Q9NPY3 652 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 FAM207AQ9NSI2 230 aaPredicted RBP19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 STIM2Q9P246 746 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 GGA2Q9UJY4 613 aa19.02■□□□□ 0.64
SMARCAL1-205ENST00000425815 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 LGALS16A8MUM7 142 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 PABPC1P11940 636 aaKnown RBP19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 ATP1A3P13637 1013 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 CHRNB2P17787 502 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 PRKCHP24723 683 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 MPLP40238 635 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 CDK17Q00537 523 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 PUM1Q14671 1186 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 SYCP1Q15431 976 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 FSCBQ5H9T9 825 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 OTUD1Q5VV17 481 aaPredicted RBP19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 CHST9Q7L1S5 443 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 TMEFF1Q8IYR6 380 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 CFAP52Q8N1V2 620 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 FIBINQ8TAL6 211 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 CYB5D2Q8WUJ1 264 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 SLC20A1Q8WUM9 679 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 UCMAQ8WVF2 138 aa19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 PRMT1Q99873 361 aaKnown RBP19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 MKRN2Q9H000 416 aaKnown RBP19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 NOCTQ9UK39 431 aaKnown RBP19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 INTS6Q9UL03 887 aaKnown RBP19.01■□□□□ 0.63
SMARCAL1-205ENST00000425815 IGHV1OR15-9A0A0B4J2B8 117 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 GFPT2O94808 682 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 TFE3P19532 575 aaPredicted RBP19■□□□□ 0.63
SMARCAL1-205ENST00000425815 TACR2P21452 398 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 PTGER3P43115 390 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 CREB5Q02930 508 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 C2CD6Q53TS8 623 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 FKBP15Q5T1M5 1219 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 RAP1GAP2Q684P5 730 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 MBLAC2Q68D91 279 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 XYLT1Q86Y38 959 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 AOPEPQ8N6M6 819 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 HJURPQ8NCD3 748 aaPredicted RBP19■□□□□ 0.63
SMARCAL1-205ENST00000425815 WFIKKN2Q8TEU8 576 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 CPA5Q8WXQ8 436 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 BTN2A3PQ96KV6 586 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 DDX50Q9BQ39 737 aaKnown RBP19■□□□□ 0.63
SMARCAL1-205ENST00000425815 TMEM245Q9H330 911 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 NLRC4Q9NPP4 1024 aa19■□□□□ 0.63
SMARCAL1-205ENST00000425815 VPS45Q9NRW7 570 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms