RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 POLR2FP61218 127 aaKnown RBP18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 SLC6A3Q01959 620 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 SYCP1Q15431 976 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 MAP7D1Q3KQU3 841 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 USP39Q53GS9 565 aaKnown RBP18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 DCAF6Q58WW2 860 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 EFHC1Q5JVL4 640 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 FKBP15Q5T1M5 1219 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 OTUD1Q5VV17 481 aaPredicted RBP18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 SLC26A9Q7LBE3 791 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 GPR161Q8N6U8 529 aaKnown RBP18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 IPO4Q8TEX9 1081 aaKnown RBP18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 SLC20A1Q8WUM9 679 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 LOXL4Q96JB6 756 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 LMLNQ96KR4 655 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 FUCA2Q9BTY2 467 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 TRIM62Q9BVG3 475 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 SLC6A17Q9H1V8 727 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 ARRDC1-AS1Q9H2J1 176 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 NLRC4Q9NPP4 1024 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 SEMA4GQ9NTN9 838 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 ELOVL2Q9NXB9 296 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 CALCOCO1Q9P1Z2 691 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 MBD1Q9UIS9 605 aaPredicted RBP18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 USP18Q9UMW8 372 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 STON1Q9Y6Q2 735 aa18.52■□□□□ 0.56
SBDSP1-202ENST00000423945 LAMA1P25391 3075 aa18.52■□□□□ 0.55
SBDSP1-202ENST00000423945 CEP192Q8TEP8 1941 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 HSF2BPO75031 334 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 GFPT2O94808 682 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 MOCS2O96007 188 aaPredicted RBP18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 MMEP08473 750 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 CHRNB2P17787 502 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 NDUFV2P19404 249 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 GABRB2P47870 512 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 RPS24P62847 133 aaKnown RBP18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 ZNF234Q14588 700 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 CCDC6Q16204 474 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 MPP7Q5T2T1 576 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 PMS2CLQ68D20 193 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 ADIPOR2Q86V24 386 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 TMEM35BQ8NCS4 154 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 ZNF397Q8NF99 534 aaPredicted RBP18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 NOX5Q96PH1 765 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 IRX2Q9BZI1 471 aaPredicted RBP18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 ABCB8Q9NUT2 735 aa18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 BCCIPQ9P287 314 aaKnown RBP eCLIP18.51■□□□□ 0.55
SBDSP1-202ENST00000423945 DAB1O75553 588 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 CD70P32970 193 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 NOMO3P69849 1222 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 CSRP2Q16527 193 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 C2CD6Q53TS8 623 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 MS4A13Q5J8X5 152 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 PLA2G2CQ5R387 149 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 XYLT1Q86Y38 959 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 DHX40Q8IX18 779 aaKnown RBP18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 ERGIC2Q96RQ1 377 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 PRMT1Q99873 361 aaKnown RBP18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 BPIFA3Q9BQP9 254 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 SMOC1Q9H4F8 434 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 CD93Q9NPY3 652 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 GGA2Q9UJY4 613 aa18.5■□□□□ 0.55
SBDSP1-202ENST00000423945 KCNU1A8MYU2 1149 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 TPM2P07951 284 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 PABPC1P11940 636 aaKnown RBP18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 TFE3P19532 575 aaPredicted RBP18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 PRKCHP24723 683 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 GBP1P32455 592 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 SOX5P35711 763 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 ID4P47928 161 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 CDK17Q00537 523 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 FMO1Q01740 532 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 EIF4HQ15056 248 aaKnown RBP18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 RAP1GAP2Q684P5 730 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 SDE2Q6IQ49 451 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 TRNP1Q6NT89 227 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 PRR23CQ6ZRP0 262 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 CHST9Q7L1S5 443 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 CFAP52Q8N1V2 620 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 PGBD3Q8N328 593 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 HJURPQ8NCD3 748 aaPredicted RBP18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 CIPCQ9C0C6 399 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 DLL3Q9NYJ7 618 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 STIM2Q9P246 746 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 INTS6Q9UL03 887 aaKnown RBP18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 CEP83Q9Y592 693 aa18.49■□□□□ 0.55
SBDSP1-202ENST00000423945 CACNA1AO00555 2505 aa18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 RHOBTB1O94844 696 aa18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 LSM8O95777 96 aaKnown RBP18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 APOEP02649 317 aa18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 CYP1A1P04798 512 aaPredicted RBP18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 CDK11BP21127 795 aaKnown RBP18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 TACR2P21452 398 aa18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 UBXN1Q04323 297 aa18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 SF3A2Q15428 464 aaKnown RBP18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 ELF2Q15723 593 aa18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 PTPRNQ16849 979 aa18.48■□□□□ 0.55
SBDSP1-202ENST00000423945 RSPO4Q2I0M5 234 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms