RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 CALR3Q96L12 384 aaKnown RBP17.61■□□□□ 0.41
COL7A1-202ENST00000422991 PEBP4Q96S96 227 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 PRMT1Q99873 361 aaKnown RBP17.61■□□□□ 0.41
COL7A1-202ENST00000422991 EBF3Q9H4W6 596 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 TRPV5Q9NQA5 729 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 SLC2A4RGQ9NR83 387 aa17.61■□□□□ 0.41
COL7A1-202ENST00000422991 TMEM110-MUSTN1A8MSY1 372 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 BUB1O43683 1085 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 BUB1BO60566 1050 aaPredicted RBP17.6■□□□□ 0.41
COL7A1-202ENST00000422991 NFATC1O95644 943 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 CYP17A1P05093 508 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 TCF4P15884 667 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 SLC6A4P31645 630 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 ADRA1BP35368 520 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 AIF1P55008 147 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 VCPP55072 806 aaKnown RBP17.6■□□□□ 0.41
COL7A1-202ENST00000422991 SLC25A11Q02978 314 aaKnown RBP17.6■□□□□ 0.41
COL7A1-202ENST00000422991 ARL13BQ3SXY8 428 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 MS4A13Q5J8X5 152 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 C11orf63Q6NUN7 778 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 CHSY1Q86X52 802 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 ADGRG2Q8IZP9 1017 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 CPA6Q8N4T0 437 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 DNASE1L2Q92874 299 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 HAPLN3Q96S86 360 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 MUTYHQ9UIF7 546 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 HS3ST4Q9Y661 456 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 MYOFQ9NZM1 2061 aa17.6■□□□□ 0.41
COL7A1-202ENST00000422991 GOLGA6L7A0A1B0GV03 622 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 MACROD2A1Z1Q3 448 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 OTOL1A6NHN0 477 aaPredicted RBP17.59■□□□□ 0.41
COL7A1-202ENST00000422991 KRT86O43790 486 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 PRPSAP2O60256 369 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 TACR2P21452 398 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 IL1R2P27930 398 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 CHKAP35790 457 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 RUNX3Q13761 415 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 LY6G5CQ5SRR4 150 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 RAP1GAP2Q684P5 730 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 RFWD3Q6PCD5 774 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 SLFN11Q7Z7L1 901 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 PRICKLE1Q96MT3 831 aaPredicted RBP17.59■□□□□ 0.41
COL7A1-202ENST00000422991 DDX50Q9BQ39 737 aaKnown RBP17.59■□□□□ 0.41
COL7A1-202ENST00000422991 ECT2Q9H8V3 914 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 C11orf16Q9NQ32 467 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 SPHK2Q9NRA0 654 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 GTSE1Q9NYZ3 720 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 PCSK1NQ9UHG2 260 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 FZD10Q9ULW2 581 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 USP18Q9UMW8 372 aa17.59■□□□□ 0.41
COL7A1-202ENST00000422991 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL7A1-202ENST00000422991 TRDMT1O14717 391 aaKnown RBP17.58■□□□□ 0.4
COL7A1-202ENST00000422991 ADH1CP00326 375 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 GGCXP38435 758 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 PFKPQ01813 784 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 DHCR24Q15392 516 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 IFI16Q16666 785 aaKnown RBP17.58■□□□□ 0.4
COL7A1-202ENST00000422991 ITPRIPL2Q3MIP1 535 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 EFHC2Q5JST6 749 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 ACBD5Q5T8D3 534 aaPredicted RBP17.58■□□□□ 0.4
COL7A1-202ENST00000422991 RHBDF2Q6PJF5 856 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 TMEM25Q86YD3 366 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 CSGALNACT1Q8TDX6 532 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 MYEOVQ96EZ4 313 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 P2RY11Q96G91 374 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 C1orf74Q96LT6 269 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 LRFN3Q9BTN0 628 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 SNRNP25Q9BV90 132 aaKnown RBP17.58■□□□□ 0.4
COL7A1-202ENST00000422991 IRX2Q9BZI1 471 aaPredicted RBP17.58■□□□□ 0.4
COL7A1-202ENST00000422991 SIK2Q9H0K1 926 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 OSBPL2Q9H1P3 480 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 GOLPH3Q9H4A6 298 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 MARK1Q9P0L2 795 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 PYCARDQ9ULZ3 195 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 SNX10Q9Y5X0 201 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 DOCK4Q8N1I0 1966 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 MIA3Q5JRA6 1907 aa17.58■□□□□ 0.4
COL7A1-202ENST00000422991 GRID2IPA4D2P6 1211 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 FAM86C2PA6NEL3 165 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 F5H5T6 163 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 HOXC11O43248 304 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-202ENST00000422991 TSPAN3O60637 253 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 MOCS3O95396 460 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 ADH5P11766 374 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 SLC1A1P43005 524 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 SGSHP51688 502 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 MLLT6P55198 1093 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-202ENST00000422991 NAP1L1P55209 391 aaKnown RBP17.57■□□□□ 0.4
COL7A1-202ENST00000422991 TAS2R40P59535 323 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 NRG1Q02297 640 aaPredicted RBP17.57■□□□□ 0.4
COL7A1-202ENST00000422991 AUHQ13825 339 aaKnown RBP17.57■□□□□ 0.4
COL7A1-202ENST00000422991 GAB4Q2WGN9 574 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 ARTNQ5T4W7 220 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 ERMARDQ5T6L9 678 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 TXNRD3NBQ6F5E7 133 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 TPGS1Q6ZTW0 290 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 C14orf80Q86SX3 495 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 DAAM2Q86T65 1068 aa17.57■□□□□ 0.4
COL7A1-202ENST00000422991 PSTKQ8IV42 348 aaKnown RBP17.57■□□□□ 0.4
COL7A1-202ENST00000422991 UBALD2Q8IYN6 164 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms