RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ANO4Q32M45 955 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 C10orf76Q5T2E6 689 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 ADGRF1Q5T601 910 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 NAIF1Q69YI7 327 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-202ENST00000422544 NADSYN1Q6IA69 706 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 RFWD3Q6PCD5 774 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 TRIM67Q6ZTA4 783 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 STRADAQ7RTN6 431 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 BMP8AQ7Z5Y6 402 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 FAM131BQ86XD5 332 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 SIX5Q8N196 739 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 ATP6V0D2Q8N8Y2 350 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 CENPIQ92674 756 aaPredicted RBP9.62□□□□□ -0.87
PDGFC-202ENST00000422544 BHMTQ93088 406 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 AZIN2Q96A70 460 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 P2RY11Q96G91 374 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 BTBD6Q96KE9 485 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 BTN2A3PQ96KV6 586 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 PHF12Q96QT6 1004 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 TKTL2Q9H0I9 626 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 ANLNQ9NQW6 1124 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 ARHGEF3Q9NR81 526 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 TMPRSS4Q9NRS4 437 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 ARHGEF38Q9NXL2 777 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 CTTNBP2NLQ9P2B4 639 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 STOML2Q9UJZ1 356 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 TFR2Q9UP52 801 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 SNX10Q9Y5X0 201 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 PIAS3Q9Y6X2 628 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 OTOGLQ3ZCN5 2332 aa9.62□□□□□ -0.87
PDGFC-202ENST00000422544 FANCMQ8IYD8 2048 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 ACACBO00763 2458 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 MAP1BP46821 2468 aaKnown RBP9.61□□□□□ -0.87
PDGFC-202ENST00000422544 CHD8Q9HCK8 2581 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 SHISA7A6NL88 538 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 NEDD8-MDP1E9PL57 170 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 SPECC1L-ADORA2AF8WAN1 911 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 I6L893 689 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-202ENST00000422544 PAGE1O75459 146 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 LATS1O95835 1130 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 ADH1CP00326 375 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 ADH5P11766 374 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 SLC6A4P31645 630 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 CTHP32929 405 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 SLC6A11P48066 632 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 GAD2Q05329 585 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 GAB4Q2WGN9 574 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 FAM133BQ5BKY9 247 aaKnown RBP9.61□□□□□ -0.87
PDGFC-202ENST00000422544 MS4A13Q5J8X5 152 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 BRMS1LQ5PSV4 323 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 PIK3R6Q5UE93 754 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 RAP1GAP2Q684P5 730 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 SCYL2Q6P3W7 929 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 TXNDC11Q6PKC3 985 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 TPRG1Q6ZUI0 275 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 LRRC8AQ8IWT6 810 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 FAM217AQ8IXS0 508 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 CPXM2Q8N436 756 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 ARFGAP1Q8N6T3 406 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 NAT16Q8N8M0 369 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 ACRBPQ8NEB7 543 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 SLC35G2Q8TBE7 412 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 ZNF564Q8TBZ8 553 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-202ENST00000422544 FNIP1Q8TF40 1166 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 CHFRQ96EP1 664 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 TMA16Q96EY4 203 aaKnown RBP9.61□□□□□ -0.87
PDGFC-202ENST00000422544 MYEOVQ96EZ4 313 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 BBS2Q9BXC9 721 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 SIK2Q9H0K1 926 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 C8orf33Q9H7E9 229 aaPredicted RBP9.61□□□□□ -0.87
PDGFC-202ENST00000422544 OSGEPQ9NPF4 335 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 TMEM51Q9NW97 253 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 PLK2Q9NYY3 685 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 UVRAGQ9P2Y5 699 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 ANAPC7Q9UJX3 599 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 INTUQ9ULD6 942 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 REXO2Q9Y3B8 237 aaKnown RBP9.61□□□□□ -0.87
PDGFC-202ENST00000422544 PAXBP1Q9Y5B6 917 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 HS3ST4Q9Y661 456 aa9.61□□□□□ -0.87
PDGFC-202ENST00000422544 USP24Q9UPU5 2620 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 RCCD1A6NED2 376 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 TMEM221A6NGB7 291 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 M0R296 226 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 MYO1FO00160 1098 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 GFRA2O00451 464 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 STK25O00506 426 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 MAN2B1O00754 1011 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 HOXC11O43248 304 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 IPO7O95373 1038 aaKnown RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 PDGFBP01127 241 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 TYRP14679 529 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 GLULP15104 373 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 DESP17661 470 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 TACR2P21452 398 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 ADRA1BP35368 520 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 GGCXP38435 758 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 GALK1P51570 392 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 SGSHP51688 502 aa9.6□□□□□ -0.87
PDGFC-202ENST00000422544 MLLT6P55198 1093 aaPredicted RBP9.6□□□□□ -0.87
PDGFC-202ENST00000422544 STARD6P59095 220 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms