RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 PTPN20Q4JDL3 420 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 DCAF6Q58WW2 860 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 TMEM215Q68D42 235 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 RNF43Q68DV7 783 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 ABCA7Q8IZY2 2146 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 TMEM35BQ8NCS4 154 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 WFIKKN2Q8TEU8 576 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 ERLEC1Q96DZ1 483 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 SLC2A13Q96QE2 648 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 GANQ9H2C0 597 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 SYNCQ9H7C4 482 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 DLL3Q9NYJ7 618 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 TMEM63CQ9P1W3 806 aa18.75■□□□□ 0.59
UBXN11-208ENST00000421827 MAP3K13O43283 966 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 GRAP2O75791 330 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 NDUFV2P19404 249 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 IL12RB1P42701 662 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 KLK7P49862 253 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 PITX1P78337 314 aaPredicted RBP18.74■□□□□ 0.59
UBXN11-208ENST00000421827 CDK17Q00537 523 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 SLC6A3Q01959 620 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 TYRO3Q06418 890 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 ENPP2Q13822 863 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 ZNF234Q14588 700 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 STARD3Q14849 445 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 ZC3H12AQ5D1E8 599 aaKnown RBP18.74■□□□□ 0.59
UBXN11-208ENST00000421827 PLA2G2CQ5R387 149 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 OLFML1Q6UWY5 402 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 DEFB106AQ8N104 65 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 FRMD1Q8N878 549 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.74■□□□□ 0.59
UBXN11-208ENST00000421827 HJURPQ8NCD3 748 aaPredicted RBP18.74■□□□□ 0.59
UBXN11-208ENST00000421827 ABCB8Q9NUT2 735 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 CALCOCO1Q9P1Z2 691 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 LIMA1Q9UHB6 759 aaKnown RBP18.74■□□□□ 0.59
UBXN11-208ENST00000421827 MBD1Q9UIS9 605 aaPredicted RBP18.74■□□□□ 0.59
UBXN11-208ENST00000421827 GGA2Q9UJY4 613 aa18.74■□□□□ 0.59
UBXN11-208ENST00000421827 BCLAF3A2AJT9 711 aaKnown RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 TYW5A2RUC4 315 aaKnown RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 CDK11BP21127 795 aaKnown RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 CDH5P33151 784 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 CREB5Q02930 508 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 ARID5AQ03989 594 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 EIF4EBP2Q13542 120 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 SF3A2Q15428 464 aaKnown RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 MS4A13Q5J8X5 152 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 TAF3Q5VWG9 929 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 CHST9Q7L1S5 443 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 SLC26A9Q7LBE3 791 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 KIAA0907Q7Z7F0 614 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 NOP9Q86U38 636 aaKnown RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 ZNF557Q8N988 423 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 WFDC5Q8TCV5 224 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 SORCS1Q8WY21 1168 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 DDX1Q92499 740 aaKnown RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 BTN2A3PQ96KV6 586 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 PRICKLE1Q96MT3 831 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 NUCKS1Q9H1E3 243 aaKnown RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 FAM204AQ9H8W3 233 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 VPS45Q9NRW7 570 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 FAM207AQ9NSI2 230 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 STIM2Q9P246 746 aa18.73■□□□□ 0.59
UBXN11-208ENST00000421827 XPO7Q9UIA9 1087 aaKnown RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 CDV3Q9UKY7 258 aaKnown RBP18.73■□□□□ 0.59
UBXN11-208ENST00000421827 ZNF217O75362 1048 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 DAB1O75553 588 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 SLC2A3P11169 496 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 PABPC1P11940 636 aaKnown RBP18.72■□□□□ 0.59
UBXN11-208ENST00000421827 ZNF18P17022 549 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 DHPSP49366 369 aaPredicted RBP18.72■□□□□ 0.59
UBXN11-208ENST00000421827 POLR2FP61218 127 aaKnown RBP18.72■□□□□ 0.59
UBXN11-208ENST00000421827 RPS24P62847 133 aaKnown RBP18.72■□□□□ 0.59
UBXN11-208ENST00000421827 NCAPHQ15003 741 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 FUT11Q495W5 492 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 LPCAT2Q7L5N7 544 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 ZDHHC17Q8IUH5 632 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 MFN1Q8IWA4 741 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 AHI1Q8N157 1196 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 ATP6V0D2Q8N8Y2 350 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 C12orf50Q8NA57 414 aaPredicted RBP18.72■□□□□ 0.59
UBXN11-208ENST00000421827 ZNF397Q8NF99 534 aaPredicted RBP18.72■□□□□ 0.59
UBXN11-208ENST00000421827 NETO1Q8TDF5 533 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 MYEOVQ96EZ4 313 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 MRGPRX1Q96LB2 322 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 SMOC1Q9H4F8 434 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 DDIT4Q9NX09 232 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 SLC12A6Q9UHW9 1150 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 SIK3Q9Y2K2 1263 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 DAAM1Q9Y4D1 1078 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 THADAQ6YHU6 1953 aa18.72■□□□□ 0.59
UBXN11-208ENST00000421827 SYNJ2BP-COX16A0A087WUM0 186 aa18.71■□□□□ 0.59
UBXN11-208ENST00000421827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.71■□□□□ 0.59
UBXN11-208ENST00000421827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.71■□□□□ 0.59
UBXN11-208ENST00000421827 LRRC10BA6NIK2 292 aa18.71■□□□□ 0.59
UBXN11-208ENST00000421827 LGALS16A8MUM7 142 aa18.71■□□□□ 0.59
UBXN11-208ENST00000421827 KCNU1A8MYU2 1149 aa18.71■□□□□ 0.59
UBXN11-208ENST00000421827 SYNCRIPO60506 623 aaKnown RBP18.71■□□□□ 0.59
UBXN11-208ENST00000421827 GFPT2O94808 682 aa18.71■□□□□ 0.59
UBXN11-208ENST00000421827 LSM8O95777 96 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms