RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 USP4Q13107 963 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 PDK2Q15119 407 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 ZNF77Q15935 545 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 DPYSL2Q16555 572 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 MS4A13Q5J8X5 152 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 ZFYVE27Q5T4F4 411 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 PIK3R6Q5UE93 754 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 PAPD7Q5XG87 772 aaKnown RBP12.93□□□□□ -0.34
TMEM53-206ENST00000420706 NADSYN1Q6IA69 706 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 C14orf80Q86SX3 495 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 RCOR2Q8IZ40 523 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 KCTD6Q8NC69 237 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 EXD1Q8NHP7 514 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
TMEM53-206ENST00000420706 RSPRY1Q96DX4 576 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 LRRC3BQ96PB8 259 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 PRMT1Q99873 361 aaKnown RBP12.93□□□□□ -0.34
TMEM53-206ENST00000420706 PCDH18Q9HCL0 1135 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.93□□□□□ -0.34
TMEM53-206ENST00000420706 KLHL11Q9NVR0 708 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 OBP2AQ9NY56 170 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 OR12D3Q9UGF7 316 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 STOML2Q9UJZ1 356 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 LSM7Q9UK45 103 aaKnown RBP12.93□□□□□ -0.34
TMEM53-206ENST00000420706 ZNF510Q9Y2H8 683 aa12.93□□□□□ -0.34
TMEM53-206ENST00000420706 DOCK8Q8NF50 2099 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 C3orf70A6NLC5 250 aaPredicted RBP12.92□□□□□ -0.34
TMEM53-206ENST00000420706 PI4K2BG5E9Z4 385 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 FAM72CH0Y354 149 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 KRT1P04264 644 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 CD48P09326 243 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 PYGMP11217 842 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 PRLRP16471 622 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 TACR2P21452 398 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 FCARP24071 287 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 IL4RP24394 825 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 SLC11A2P49281 568 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 SEMA3BQ13214 749 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 FAM133BQ5BKY9 247 aaKnown RBP12.92□□□□□ -0.34
TMEM53-206ENST00000420706 ARTNQ5T4W7 220 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 ACBD5Q5T8D3 534 aaPredicted RBP12.92□□□□□ -0.34
TMEM53-206ENST00000420706 FAM72AQ5TYM5 149 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 TANGO2Q6ICL3 276 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 FAM72DQ6L9T8 149 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 MFSD7Q6UXD7 560 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 OTOP3Q7RTS5 596 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 ANKS1BQ7Z6G8 1248 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 FAM72BQ86X60 149 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 MAP7D3Q8IWC1 876 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 KIAA1958Q8N8K9 716 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 TTC16Q8NEE8 873 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 E2F7Q96AV8 911 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 ZFP14Q9HCL3 533 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 PRDM6Q9NQX0 595 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 EPS15L1Q9UBC2 864 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 SNX12Q9UMY4 172 aa12.92□□□□□ -0.34
TMEM53-206ENST00000420706 LRRD1A4D1F6 860 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 HEPACAM2A8MVW5 462 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 KCNK3O14649 394 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 SCAMP3O14828 347 aaKnown RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 CREB3O43889 395 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 SLC6A4P31645 630 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 GGCXP38435 758 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 HCAR3P49019 387 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 ZNF135P52742 658 aaPredicted RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 ZNF211Q13398 564 aaPredicted RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 AUHQ13825 339 aaKnown RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 DPYSL3Q14195 570 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 KRT81Q14533 505 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 SMAD2Q15796 467 aaKnown RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 TAZQ16635 292 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 C5orf22Q49AR2 442 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 ODF2Q5BJF6 829 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 PPP6R3Q5H9R7 873 aaPredicted RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 ADGRF1Q5T601 910 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 RAP1GAP2Q684P5 730 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 FBXL22Q6P050 247 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 AADACL2Q6P093 401 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 SPOCD1Q6ZMY3 1216 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 VSIG1Q86XK7 387 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 BBS7Q8IWZ6 715 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 FAM217AQ8IXS0 508 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 ZNF683Q8IZ20 524 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 ST13P5Q8NFI4 369 aaPredicted RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 BPIFB1Q8TDL5 484 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 TSC1Q92574 1164 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 ZNF592Q92610 1267 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 RBM41Q96IZ5 413 aaKnown RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 PBKQ96KB5 322 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 OSBPL9Q96SU4 736 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 PSMB7Q99436 277 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 DDX50Q9BQ39 737 aaKnown RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 PHF7Q9BWX1 381 aaPredicted RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 PLA2G2FQ9BZM2 168 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 CARD9Q9H257 536 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 LINC00597Q9H2U6 94 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 CWC15Q9P013 229 aaKnown RBP12.91□□□□□ -0.34
TMEM53-206ENST00000420706 TBC1D14Q9P2M4 693 aa12.91□□□□□ -0.34
TMEM53-206ENST00000420706 SAR1BQ9Y6B6 198 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms