RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 LYSMD4Q5XG99 296 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 IL31Q6EBC2 164 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 SDE2Q6IQ49 451 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 RFWD3Q6PCD5 774 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 BEND5Q7L4P6 421 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 ENOSF1Q7L5Y1 443 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 TMEM110Q86TL2 294 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 METTL3Q86U44 580 aaKnown RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 ADIPOR2Q86V24 386 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 SYT12Q8IV01 421 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 DEFB119Q8N690 84 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 STK32AQ8WU08 396 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 AZIN2Q96A70 460 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 PRICKLE1Q96MT3 831 aaPredicted RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 USP36Q9P275 1121 aaKnown RBP11.49□□□□□ -0.57
SSBP3-206ENST00000420121 APEX2Q9UBZ4 518 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 NAALADL1Q9UQQ1 740 aa11.49□□□□□ -0.57
SSBP3-206ENST00000420121 TP53BP1Q12888 1972 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-206ENST00000420121 KCNJ18B7U540 433 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 AP5Z1O43299 807 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 ZNF217O75362 1048 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 KCNK5O95279 499 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 GNA15P30679 374 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 CD70P32970 193 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 TBX4P57082 545 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 RPL6Q02878 288 aaKnown RBP11.48□□□□□ -0.57
SSBP3-206ENST00000420121 ZNF33AQ06730 810 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 PDCLQ13371 301 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 NNTQ13423 1086 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 TAF5Q15542 800 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 PTPRNQ16849 979 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 ARHGAP44Q17R89 818 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 EXOC3L4Q17RC7 722 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 TRIM61Q5EBN2 209 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 NUGGCQ68CJ6 796 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 SLC23A3Q6PIS1 610 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 SLC36A4Q6YBV0 504 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 GBP6Q6ZN66 633 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 CLEC17AQ6ZS10 378 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 TAC4Q86UU9 113 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 ADAM32Q8TC27 787 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 DDX1Q92499 740 aaKnown RBP11.48□□□□□ -0.57
SSBP3-206ENST00000420121 TMA16Q96EY4 203 aaKnown RBP11.48□□□□□ -0.57
SSBP3-206ENST00000420121 ZNF419Q96HQ0 510 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-206ENST00000420121 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
SSBP3-206ENST00000420121 CIPCQ9C0C6 399 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 TMEM245Q9H330 911 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 CAPN10Q9HC96 672 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 ITM2CQ9NQX7 267 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 ST7Q9NRC1 585 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 ABCB8Q9NUT2 735 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 XPO7Q9UIA9 1087 aaKnown RBP11.48□□□□□ -0.57
SSBP3-206ENST00000420121 USP24Q9UPU5 2620 aa11.48□□□□□ -0.57
SSBP3-206ENST00000420121 FRYQ5TBA9 3013 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 TMEM131Q92545 1883 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 IRAK2O43187 625 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 THAP12O43422 761 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 TBL1XO60907 577 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 IGLV3-19P01714 112 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 PNMA6AP0CW24 399 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-206ENST00000420121 PABPC1P11940 636 aaKnown RBP11.47□□□□□ -0.57
SSBP3-206ENST00000420121 HLA-EP13747 358 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 HOXD12P35452 270 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 ACADSBP45954 432 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 CAMK2GQ13555 558 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-206ENST00000420121 MPP7Q5T2T1 576 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 N4BP2L1Q5TBK1 243 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-206ENST00000420121 KIAA1324Q6UXG2 1013 aaKnown RBP11.47□□□□□ -0.57
SSBP3-206ENST00000420121 CHST9Q7L1S5 443 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 TMPRSS6Q8IU80 811 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 UNC45BQ8IWX7 931 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 WFIKKN2Q8TEU8 576 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 CYB5D2Q8WUJ1 264 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 UCMAQ8WVF2 138 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 FAM149B1Q96BN6 582 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 MYO19Q96H55 970 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 SERPINB11Q96P15 392 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 CPXM1Q96SM3 734 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 NUCKS1Q9H1E3 243 aaKnown RBP11.47□□□□□ -0.57
SSBP3-206ENST00000420121 THAP9Q9H5L6 903 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 PRDM16Q9HAZ2 1276 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 TMEM9BQ9NQ34 198 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 FSCN3Q9NQT6 498 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 LMBRD1Q9NUN5 540 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 WSB2Q9NYS7 404 aaPredicted RBP11.47□□□□□ -0.57
SSBP3-206ENST00000420121 GGA2Q9UJY4 613 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 INTS6Q9UL03 887 aaKnown RBP11.47□□□□□ -0.57
SSBP3-206ENST00000420121 PCDHGC3Q9UN70 934 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 TLR6Q9Y2C9 796 aa11.47□□□□□ -0.57
SSBP3-206ENST00000420121 AKAP13Q12802 2813 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 FOXN3O00409 490 aaPredicted RBP11.46□□□□□ -0.57
SSBP3-206ENST00000420121 GIPC1O14908 333 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 SART1O43290 800 aaKnown RBP11.46□□□□□ -0.57
SSBP3-206ENST00000420121 MED7O43513 233 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 TIMM44O43615 452 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 EPHX1P07099 455 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 ENGP17813 658 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 ERCC5P28715 1186 aaPredicted RBP11.46□□□□□ -0.57
SSBP3-206ENST00000420121 PMLP29590 882 aa11.46□□□□□ -0.57
SSBP3-206ENST00000420121 CLCN1P35523 988 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms