RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 CHSY1Q86X52 802 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 AHI1Q8N157 1196 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 HJURPQ8NCD3 748 aaPredicted RBP13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 WFIKKN2Q8TEU8 576 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 RNF34Q969K3 372 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 ERLEC1Q96DZ1 483 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 SLC39A13Q96H72 371 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 ZC3H10Q96K80 434 aaKnown RBP13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 BTN2A3PQ96KV6 586 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 SLC2A13Q96QE2 648 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 SEMA4GQ9NTN9 838 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 ABCB8Q9NUT2 735 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 COX16Q9P0S2 106 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 STIM2Q9P246 746 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 SLC12A6Q9UHW9 1150 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 HCN2Q9UL51 889 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 CLEC4EQ9ULY5 219 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 SIK3Q9Y2K2 1263 aa13.21□□□□□ -0.29
HMGN1P4-201ENST00000419500 PTPRZ1P23471 2315 aaPredicted RBP13.21□□□□□ -0.3
HMGN1P4-201ENST00000419500 GOLGA6L7A0A1B0GV03 622 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 FAM170AA1A519 330 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 SMTNL1A8MU46 457 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 MAP3K13O43283 966 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 SYNCRIPO60506 623 aaKnown RBP13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 FOXD2O60548 495 aaPredicted RBP13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 DAB1O75553 588 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 EPN2O95208 641 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 IGLV3-25P01717 112 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 MMEP08473 750 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 SLC2A3P11169 496 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 ZNF18P17022 549 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 ABCB4P21439 1286 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 HLA-FP30511 346 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 SLC6A4P31645 630 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 CCR1P32246 355 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 CDH5P33151 784 aaPredicted RBP13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 SOX5P35711 763 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 P2RY2P41231 377 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 STAT1P42224 750 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 ID4P47928 161 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 SLC6A3Q01959 620 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 CDH18Q13634 790 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 NCAPHQ15003 741 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 ZC3H12AQ5D1E8 599 aaKnown RBP13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 FAM102AQ5T9C2 384 aaPredicted RBP13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 NADSYN1Q6IA69 706 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 SERPINA13PQ6UXR4 307 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 ERICH1Q86X53 443 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 ZNF677Q86XU0 584 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 MFN1Q8IWA4 741 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 DEFB106AQ8N104 65 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 ATP6V0D2Q8N8Y2 350 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 OLIG1Q8TAK6 271 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 DDX1Q92499 740 aaKnown RBP13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 PRICKLE1Q96MT3 831 aaPredicted RBP13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 BPIFA3Q9BQP9 254 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 NUCKS1Q9H1E3 243 aaKnown RBP13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 DUSP15Q9H1R2 295 aaPredicted RBP13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 ARRDC1-AS1Q9H2J1 176 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 PARD6AQ9NPB6 346 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 ELOVL2Q9NXB9 296 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 GGA2Q9UJY4 613 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 PCDHGA5Q9Y5G8 931 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 STON1Q9Y6Q2 735 aa13.2□□□□□ -0.3
HMGN1P4-201ENST00000419500 SPTBN4Q9H254 2564 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 A0A1W2PQF6 199 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 WASH3PC4AMC7 463 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 EPHB6O15197 1021 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 TIMM44O43615 452 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 PABPC1P11940 636 aaKnown RBP13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 ATP1A3P13637 1013 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 GABRG2P18507 467 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 PTMSP20962 102 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 NOS2P35228 1153 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 MPLP40238 635 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 IL12RB1P42701 662 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 ZNF165P49910 485 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 JAM2P57087 298 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 RNASE9P60153 205 aaKnown RBP13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 PITX1P78337 314 aaPredicted RBP13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 NME3Q13232 169 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 ZNF234Q14588 700 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 CSRP2Q16527 193 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 FNDC3BQ53EP0 1204 aaKnown RBP13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 MS4A13Q5J8X5 152 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 RAP1GAP2Q684P5 730 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 PMS2CLQ68D20 193 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 KIAA1211LQ6NV74 962 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 CHST9Q7L1S5 443 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 LPCAT2Q7L5N7 544 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 CARNMT1Q8N4J0 409 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 C12orf50Q8NA57 414 aaPredicted RBP13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 ZNF397Q8NF99 534 aaPredicted RBP13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 RLN3Q8WXF3 142 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 SORCS1Q8WY21 1168 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 SPOCK2Q92563 424 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 C18orf8Q96DM3 657 aa13.19□□□□□ -0.3
HMGN1P4-201ENST00000419500 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms