RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ZNF699Q32M78 642 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 EDRF1Q3B7T1 1238 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 WDR72Q3MJ13 1102 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 CFAP221Q4G0U5 840 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 COBLL1Q53SF7 1204 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 FAM78AQ5JUQ0 283 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 INTS8Q75QN2 995 aaKnown RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 DNAJB7Q7Z6W7 309 aaPredicted RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 ITIH5Q86UX2 942 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 SPACA3Q8IXA5 215 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 ELOA2Q8IYF1 753 aaPredicted RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 FAM186BQ8IYM0 893 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 MYLPFQ96A32 169 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 SYAP1Q96A49 352 aaPredicted RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 ZSWIM3Q96MP5 696 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 KXD1Q9BQD3 176 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 PI4K2AQ9BTU6 479 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 DUSP15Q9H1R2 295 aaPredicted RBP7.37□□□□□ -1.23
HMGN1-205ENST00000419378 SMYD3Q9H7B4 428 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 ARHGEF4Q9NR80 690 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 SLC2A4RGQ9NR83 387 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 PRR13Q9NZ81 148 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 GTF3C4Q9UKN8 822 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 EMC9Q9Y3B6 208 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 ASB3Q9Y575 518 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 NME7Q9Y5B8 376 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 VPS13AQ96RL7 3174 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 MYO15AQ9UKN7 3530 aa7.37□□□□□ -1.23
HMGN1-205ENST00000419378 LOC100996750A0A140TA64 210 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 PRR19A6NJB7 356 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 WASH4PA8MWX3 477 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 IKBKBO14920 756 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 ATP2C2O75185 946 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 CLSTN1O94985 981 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 KCNH1O95259 989 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 FGF19O95750 216 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 CEACAM5P06731 702 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 PDGFRBP09619 1106 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 FURINP09958 794 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 FAM163BP0C2L3 166 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 TRIM49P0CI25 452 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 TRIM49CP0CI26 452 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 KRT13P13646 458 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 CYP2F1P24903 491 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 GABRR2P28476 465 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 PIK3CAP42336 1068 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 GCLMP48507 274 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 PPP2R2AP63151 447 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 GPC5P78333 572 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 ENPEPQ07075 957 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 PPP3CAQ08209 521 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 ZNF667Q5HYK9 610 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 STXBP5Q5T5C0 1151 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 CWF19L1Q69YN2 538 aaKnown RBP7.36□□□□□ -1.23
HMGN1-205ENST00000419378 TANGO2Q6ICL3 276 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 FAM171BQ6P995 826 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 SCARA5Q6ZMJ2 495 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 C4orf50Q6ZRC1 276 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 GAREM2Q75VX8 874 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 SPATA2LQ8IUW3 424 aaPredicted RBP7.36□□□□□ -1.23
HMGN1-205ENST00000419378 ADSSL1Q8N142 457 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 PLD6Q8N2A8 252 aaKnown RBP7.36□□□□□ -1.23
HMGN1-205ENST00000419378 STKLD1Q8NE28 680 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 OR6B3Q8NGW1 331 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 ZSCAN18Q8TBC5 510 aaPredicted RBP7.36□□□□□ -1.23
HMGN1-205ENST00000419378 SMARCD2Q92925 531 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 ELSPBP1Q96BH3 223 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 EEF2KMTQ96G04 330 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 FUBP3Q96I24 572 aaKnown RBP eCLIP7.36□□□□□ -1.23
HMGN1-205ENST00000419378 MRGPRX3Q96LB0 322 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 HSPA12BQ96MM6 686 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 TSG101Q99816 390 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 KRTAP4-6Q9BYQ5 205 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 GTPBP4Q9BZE4 634 aaKnown RBP7.36□□□□□ -1.23
HMGN1-205ENST00000419378 SDCBP2Q9H190 292 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 SNX25Q9H3E2 840 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 MFSD1Q9H3U5 465 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 DPEP3Q9H4B8 488 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 SLITRK6Q9H5Y7 841 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 CRTAC1Q9NQ79 661 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 FANCLQ9NW38 375 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 WNT16Q9UBV4 365 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 MAN1B1Q9UKM7 699 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 CDH9Q9ULB4 789 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 CA14Q9ULX7 337 aa7.36□□□□□ -1.23
HMGN1-205ENST00000419378 CACNA1HO95180 2353 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 COL4A3Q01955 1670 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 PTPRDP23468 1912 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 NCANO14594 1321 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 NUP210Q8TEM1 1887 aaPredicted RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 TRIM49BA6NDI0 452 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 SLC38A8A6NNN8 435 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 A8MXQ7 604 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 H0Y8X5 98 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 H3BS24 57 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 PSMA7O14818 248 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 CETN3O15182 167 aa7.35□□□□□ -1.23
HMGN1-205ENST00000419378 SLC16A3O15427 465 aaKnown RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 ASS1P00966 412 aaKnown RBP7.35□□□□□ -1.23
HMGN1-205ENST00000419378 HLA-DRAP01903 254 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms