RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 CAVIN2O95810 425 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 APOEP02649 317 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 CYP11B1P15538 503 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 NDUFV2P19404 249 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 IL12RB1P42701 662 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 ATXN1P54253 815 aaKnown RBP17.1■□□□□ 0.33
LINC00404-201ENST00000418660 FOXK2Q01167 660 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 ARID5AQ03989 594 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 ZNF234Q14588 700 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 STARD3Q14849 445 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 DCAF6Q58WW2 860 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 SPDYCQ5MJ68 293 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 OR6B2Q6IFH4 312 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 LPCAT2Q7L5N7 544 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 DGLUCYQ7Z3D6 616 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 DEFB106AQ8N104 65 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 FRMD1Q8N878 549 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 SLC2A13Q96QE2 648 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 RTKNQ9BST9 563 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 PDCL3Q9H2J4 239 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 ABCB8Q9NUT2 735 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC00404-201ENST00000418660 FRYLO94915 3013 aa17.1■□□□□ 0.33
LINC00404-201ENST00000418660 HSF2BPO75031 334 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 ZNF217O75362 1048 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 MOCS2O96007 188 aaPredicted RBP17.09■□□□□ 0.33
LINC00404-201ENST00000418660 ERBB2P04626 1255 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 CDH5P33151 784 aaPredicted RBP17.09■□□□□ 0.33
LINC00404-201ENST00000418660 DHPSP49366 369 aaPredicted RBP17.09■□□□□ 0.33
LINC00404-201ENST00000418660 CDK17Q00537 523 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 MYL5Q02045 173 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 EIF4EBP2Q13542 120 aaPredicted RBP17.09■□□□□ 0.33
LINC00404-201ENST00000418660 PTPN20Q4JDL3 420 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 AASDHQ4L235 1098 aaPredicted RBP17.09■□□□□ 0.33
LINC00404-201ENST00000418660 ZC3H12AQ5D1E8 599 aaKnown RBP17.09■□□□□ 0.33
LINC00404-201ENST00000418660 MS4A13Q5J8X5 152 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 FKBP15Q5T1M5 1219 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 SLC36A4Q6YBV0 504 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 FAM183BPQ6ZVS7 135 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 CHST9Q7L1S5 443 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 AHI1Q8N157 1196 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 HJURPQ8NCD3 748 aaPredicted RBP17.09■□□□□ 0.33
LINC00404-201ENST00000418660 TMEM35BQ8NCS4 154 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 BTN2A3PQ96KV6 586 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 MRGPRX1Q96LB2 322 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 SYNCQ9H7C4 482 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 GGA2Q9UJY4 613 aa17.09■□□□□ 0.33
LINC00404-201ENST00000418660 SPAG17Q6Q759 2223 aa17.08■□□□□ 0.33
LINC00404-201ENST00000418660 MYO18AQ92614 2054 aaKnown RBP17.08■□□□□ 0.33
LINC00404-201ENST00000418660 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 TYW5A2RUC4 315 aaKnown RBP17.08■□□□□ 0.32
LINC00404-201ENST00000418660 F8VZ95 297 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 SLC30A4O14863 429 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 GDF9O60383 454 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 SYNCRIPO60506 623 aaKnown RBP17.08■□□□□ 0.32
LINC00404-201ENST00000418660 PABPC1P11940 636 aaKnown RBP17.08■□□□□ 0.32
LINC00404-201ENST00000418660 PITX1P78337 314 aaPredicted RBP17.08■□□□□ 0.32
LINC00404-201ENST00000418660 SLC6A3Q01959 620 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 FUT11Q495W5 492 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 OLFML1Q6UWY5 402 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 SLC26A9Q7LBE3 791 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 CYP2U1Q7Z449 544 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 ADIPOR2Q86V24 386 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 ZDHHC17Q8IUH5 632 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 MFN1Q8IWA4 741 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 TMEFF1Q8IYR6 380 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 ATP6V0D2Q8N8Y2 350 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 ANKRD20A12PQ8NF67 263 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 ZNF397Q8NF99 534 aaPredicted RBP17.08■□□□□ 0.32
LINC00404-201ENST00000418660 FIBINQ8TAL6 211 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 WFDC5Q8TCV5 224 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 SORCS1Q8WY21 1168 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 ERLEC1Q96DZ1 483 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 PRICKLE1Q96MT3 831 aaPredicted RBP17.08■□□□□ 0.32
LINC00404-201ENST00000418660 NUCKS1Q9H1E3 243 aaKnown RBP17.08■□□□□ 0.32
LINC00404-201ENST00000418660 GANQ9H2C0 597 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 SMOC1Q9H4F8 434 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 FAM204AQ9H8W3 233 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 STIM2Q9P246 746 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 LIMA1Q9UHB6 759 aaKnown RBP17.08■□□□□ 0.32
LINC00404-201ENST00000418660 SLC12A6Q9UHW9 1150 aa17.08■□□□□ 0.32
LINC00404-201ENST00000418660 IGHV1OR15-9A0A0B4J2B8 117 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 GRAP2O75791 330 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 SLC2A3P11169 496 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 PRKCHP24723 683 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 CD70P32970 193 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 COPB1P53618 953 aaKnown RBP17.07■□□□□ 0.32
LINC00404-201ENST00000418660 LIMK1P53667 647 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 RPS24P62847 133 aaKnown RBP17.07■□□□□ 0.32
LINC00404-201ENST00000418660 MBLAC2Q68D91 279 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 SERPINA13PQ6UXR4 307 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 METTL3Q86U44 580 aaKnown RBP17.07■□□□□ 0.32
LINC00404-201ENST00000418660 DDX1Q92499 740 aaKnown RBP17.07■□□□□ 0.32
LINC00404-201ENST00000418660 MYEOVQ96EZ4 313 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 SLC6A17Q9H1V8 727 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 PRDM16Q9HAZ2 1276 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 DDIT4Q9NX09 232 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 XPO7Q9UIA9 1087 aaKnown RBP17.07■□□□□ 0.32
LINC00404-201ENST00000418660 PLA2G4CQ9UP65 541 aa17.07■□□□□ 0.32
LINC00404-201ENST00000418660 DAAM1Q9Y4D1 1078 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms