RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 USP25Q9UHP3 1055 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 ZHX1Q9UKY1 873 aaPredicted RBP6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 TRIM17Q9Y577 477 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 PCDHA3Q9Y5H8 950 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 PCDHA10Q9Y5I2 948 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 ACTL7AQ9Y615 435 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 MGAMO43451 1857 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 PLXNA1Q9UIW2 1896 aa6.45□□□□□ -1.38
NIFKP3-201ENST00000417799 ZSWIM8A7E2V4 1837 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 KINO60870 393 aaKnown RBP6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 MED24O75448 989 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 HRGP04196 525 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 CYBAP13498 195 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 BMP7P18075 431 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 RHCEP18577 417 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 FPR1P21462 350 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 MUTP22033 750 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 AGFG1P52594 562 aaKnown RBP6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 EPHB4P54760 987 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 RHDQ02161 417 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 SP4Q02446 784 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 TLE1Q04724 770 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 ARHGAP1Q07960 439 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 MRPL49Q13405 166 aaKnown RBP6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 CTTNQ14247 550 aaKnown RBP6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 ZRSR1Q15695 479 aaKnown RBP6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 TMEM119Q4V9L6 283 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 COBLL1Q53SF7 1204 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 TMEM63BQ5T3F8 832 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 RRAGBQ5VZM2 374 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 MIS18BP1Q6P0N0 1132 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 CATSPER3Q86XQ3 398 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 GPR135Q8IZ08 494 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 KIAA0319LQ8IZA0 1049 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 IQUBQ8NA54 791 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 FAM156AQ8NDB6 213 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 TRPV1Q8NER1 839 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 PJA1Q8NG27 643 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 NEK9Q8TD19 979 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 SEPT1Q8WYJ6 367 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 ARL8AQ96BM9 186 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 TIGD1Q96MW7 591 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 PLIN2Q99541 437 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 NT5C3AQ9H0P0 336 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 EPC1Q9H2F5 836 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 NELFAQ9H3P2 528 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 TUFT1Q9NNX1 390 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 DDX19AQ9NUU7 478 aaKnown RBP6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 RGL1Q9NZL6 768 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 Q9Y3F1 56 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 DUSP10Q9Y6W6 482 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 KDM3AQ9Y4C1 1321 aa6.44□□□□□ -1.38
NIFKP3-201ENST00000417799 LRRC37A2A6NM11 1700 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 A0A088AWK7 358 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 IGKV6D-21A0A0A0MT36 114 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 GSTTP1A0A1W2PQM5 241 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 CAPN8A6NHC0 703 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 H3BUI4 141 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 FOXN1O15353 648 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 SEPT4O43236 478 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 TEX33O43247 280 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 LAMTOR5O43504 91 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 LYPLA2O95372 231 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 SUPT20HL2P0C7V6 817 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 HSPA8P11142 646 aaKnown RBP6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 AKR1A1P14550 325 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 ALOX15P16050 662 aaPredicted RBP6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 MALP21145 153 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 TCF7P36402 384 aaPredicted RBP6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 STAT6P42226 847 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 QARSP47897 775 aaKnown RBP6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 CTCFP49711 727 aaPredicted RBP6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 CTXN1P60606 82 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 PSMC5P62195 406 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 CYP4A11Q02928 519 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 LONRF3Q496Y0 759 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 MAP3K21Q5TCX8 1036 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 AFMIDQ63HM1 303 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 SWSAP1Q6NVH7 229 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 CAVIN1Q6NZI2 390 aaKnown RBP6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 KRBA2Q6ZNG9 492 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 TAX1BP1Q86VP1 789 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 ELOA2Q8IYF1 753 aaPredicted RBP6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 CEP57L1Q8IYX8 460 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 CNNM3Q8NE01 707 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 OR6J1Q8NGC5 347 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 PPTC7Q8NI37 304 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 FEZF2Q8TBJ5 459 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 LRRC15Q8TF66 581 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 RAD54LQ92698 747 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 SYAP1Q96A49 352 aaPredicted RBP6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 DHX58Q96C10 678 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 FAM167AQ96KS9 214 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 SPATA33Q96N06 139 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 GPR20Q99678 358 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 LXNQ9BS40 222 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 CUEDC2Q9H467 287 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 CLSTN2Q9H4D0 955 aa6.43□□□□□ -1.38
NIFKP3-201ENST00000417799 BLOC1S4Q9NUP1 217 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms