RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NRG1Q02297 640 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 RASA2Q15283 850 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 TPSAB1Q15661 275 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 DDR2Q16832 855 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 RTP2Q5QGT7 225 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 UBAP2Q5T6F2 1119 aaKnown RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 SLC8B1Q6J4K2 584 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 ATAD1Q8NBU5 361 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 UHMK1Q8TAS1 419 aaKnown RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 EPS8L3Q8TE67 593 aaKnown RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 TOP1MTQ969P6 601 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 SPATA13Q96N96 652 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 C11orf49Q9H6J7 331 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 LRRC4CQ9HCJ2 640 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 ANLNQ9NQW6 1124 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 PLXNA3P51805 1871 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 A0A1W2PQH9 124 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 SRRM3A6NNA2 597 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 NT5C1B-RDH14C9J2C7 533 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 FAM72CH0Y354 149 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 SPAG6O75602 509 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 MAP3K6O95382 1288 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 HAPLN1P10915 354 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 ZNF33AQ06730 810 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 IFRD2Q12894 506 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 MTA1Q13330 715 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 ACBD5Q5T8D3 534 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 FAM72AQ5TYM5 149 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 FAM72DQ6L9T8 149 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 ARHGEF18Q6ZSZ5 1173 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 FAM72BQ86X60 149 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 TDRPQ86YL5 185 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 RNF168Q8IYW5 571 aaPredicted RBP17.32■□□□□ 0.36
SSBP3-205ENST00000417664 LRRC39Q96DD0 335 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 PGLYRP2Q96PD5 576 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 CWH43Q9H720 699 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 MTRRQ9UBK8 725 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 LGALS13Q9UHV8 139 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 TLR6Q9Y2C9 796 aa17.32■□□□□ 0.36
SSBP3-205ENST00000417664 TCRBV7S3A2A0A539 114 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 GOLGA8MH3BSY2 632 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 FGF10O15520 208 aaPredicted RBP17.31■□□□□ 0.36
SSBP3-205ENST00000417664 LRIG2O94898 1065 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 AMHP03971 560 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 EPHB2P29323 1055 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 HOXC13P31276 330 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 HPDP32754 393 aaPredicted RBP17.31■□□□□ 0.36
SSBP3-205ENST00000417664 SARNPP82979 210 aaKnown RBP17.31■□□□□ 0.36
SSBP3-205ENST00000417664 SEMA5AQ13591 1074 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 LONRF1Q17RB8 773 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 CCDC38Q502W7 563 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 DNAJC21Q5F1R6 531 aaKnown RBP17.31■□□□□ 0.36
SSBP3-205ENST00000417664 FNBP1LQ5T0N5 605 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 B4GALNT4Q76KP1 1039 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 LZTR1Q8N653 840 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 CCDC110Q8TBZ0 833 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 DIS3LQ8TF46 1054 aaKnown RBP17.31■□□□□ 0.36
SSBP3-205ENST00000417664 IGSF21Q96ID5 467 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 PRDM12Q9H4Q4 367 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 NMUR1Q9HB89 426 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 ETNK1Q9HBU6 452 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 TLR8Q9NR97 1041 aaKnown RBP17.31■□□□□ 0.36
SSBP3-205ENST00000417664 HSFX1Q9UBD0 423 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 HCSTQ9UBK5 93 aa17.31■□□□□ 0.36
SSBP3-205ENST00000417664 UPP2O95045 317 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 TIMP1P01033 207 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 MDH1P40925 334 aaKnown RBP17.3■□□□□ 0.36
SSBP3-205ENST00000417664 NRLP54845 237 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 ARPP19P56211 112 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 FASTKD3Q14CZ7 662 aaKnown RBP17.3■□□□□ 0.36
SSBP3-205ENST00000417664 MGAT5BQ3V5L5 792 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 ANKRD20A2Q5SQ80 823 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 ANKRD20A1Q5TYW2 823 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 ANKRD20A3Q5VUR7 823 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 LEKR1Q6ZMV7 388 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 RNF19BQ6ZMZ0 732 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 TMEM173Q86WV6 379 aaPredicted RBP17.3■□□□□ 0.36
SSBP3-205ENST00000417664 FBXO22Q8NEZ5 403 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 CASP10Q92851 521 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 ZNF689Q96CS4 500 aaPredicted RBP17.3■□□□□ 0.36
SSBP3-205ENST00000417664 HDAC11Q96DB2 347 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 P2RY11Q96G91 374 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 C1orf74Q96LT6 269 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 LGMNQ99538 433 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 PRDM10Q9NQV6 1147 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 EIF2B3Q9NR50 452 aaKnown RBP17.3■□□□□ 0.36
SSBP3-205ENST00000417664 SLC12A6Q9UHW9 1150 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 MFHAS1Q9Y4C4 1052 aa17.3■□□□□ 0.36
SSBP3-205ENST00000417664 EXOC1LA0A1B0GW35 172 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 SMIM23A6NLE4 172 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 KCNU1A8MYU2 1149 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 APRTP07741 180 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 VAV1P15498 845 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 SLCO1A2P46721 670 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 TUFMP49411 452 aaKnown RBP17.29■□□□□ 0.36
SSBP3-205ENST00000417664 ATP1A2P50993 1020 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 IRAK1P51617 712 aa17.29■□□□□ 0.36
SSBP3-205ENST00000417664 PPIDQ08752 370 aaKnown RBP17.29■□□□□ 0.36
SSBP3-205ENST00000417664 AP1B1Q10567 949 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms