RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 L2HGDHQ9H9P8 463 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 LMBRD1Q9NUN5 540 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 MARCH5Q9NX47 278 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 DACT1Q9NYF0 836 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 RGL1Q9NZL6 768 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 ZC3H7BQ9UGR2 993 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 FBXL7Q9UJT9 491 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 ODF2LQ9ULJ1 636 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 G3BP2Q9UN86 482 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 MRPL11Q9Y3B7 192 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 SNX11Q9Y5W9 270 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 GMEB1Q9Y692 573 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 ATMQ13315 3056 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 PHLPP2Q6ZVD8 1323 aa5.88□□□□□ -1.47
ECHDC1-206ENST00000417628 F5P12259 2224 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 SSU72P8A0A1W2PR75 194 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 WDR27A2RRH5 827 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 GOLGA6L9A6NEM1 432 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 CBX4O00257 560 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 NEMP1O14524 444 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 NRP1O14786 923 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 GSC2O15499 205 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 CYP26A1O43174 497 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 BRINP1O60477 761 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 STAM2O75886 525 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 ERLIN2O94905 339 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 SLU7O95391 586 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 ALDH2P05091 517 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 BPIP17213 487 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 VIPR2P41587 438 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 PSMD7P51665 324 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 CDR1P51861 262 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 ROR2Q01974 943 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 GRSF1Q12849 480 aaKnown RBP eCLIP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 PAK1Q13153 545 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 DMC1Q14565 340 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 STAT4Q14765 748 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 CLPPQ16740 277 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 RRP12Q5JTH9 1297 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 NKAPLQ5M9Q1 402 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 SPDYCQ5MJ68 293 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 ZFYVE27Q5T4F4 411 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 C20orf194Q5TEA3 1177 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 KIAA1614Q5VZ46 1190 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 STOX1Q6ZVD7 989 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 LRRC49Q8IUZ0 686 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 REXO1L1PQ8IX06 675 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 ELOA2Q8IYF1 753 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 GPR65Q8IYL9 337 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 KIAA0319LQ8IZA0 1049 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 EXD3Q8N9H8 876 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 SMYD1Q8NB12 490 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 GIMAP8Q8ND71 665 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 TSTD1Q8NFU3 115 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 TTC8Q8TAM2 541 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 SEPT1Q8WYJ6 367 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 N4BP2L2Q92802 583 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 LPPQ93052 612 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 SMARCE1Q969G3 411 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 SAAL1Q96ER3 474 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 TMEM209Q96SK2 561 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 CDIP1Q9H305 208 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 LUC7LQ9NQ29 371 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 ERVK13-1Q9NX77 482 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 SPATA7Q9P0W8 599 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 PPARGC1AQ9UBK2 798 aaKnown RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 PRG3Q9Y2Y8 225 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 COQ6Q9Y2Z9 468 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 NCANO14594 1321 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 PCNX1Q96RV3 2341 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 LRRK2Q5S007 2527 aa5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 USP9YO00507 2555 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-206ENST00000417628 NF1P21359 2839 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 PDCD11Q14690 1871 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 TRBV23OR9-2A0A075B6M9 112 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 C7orf72A4D263 438 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 TSPY2A6NKD2 308 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 ZNF891A8MT65 544 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 HEPACAM2A8MVW5 462 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 GOLGA6L19H0YKK7 550 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 M0R2C6 588 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 ABLIM1O14639 778 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 WNT9AO14904 365 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 GPR39O43194 453 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 NMT2O60551 498 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 GPR32O75388 356 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 DDHD2O94830 711 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 EFEMP2O95967 443 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 MYL1P05976 194 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 C8BP07358 591 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 SRGAP2CP0DJJ0 459 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 IDO1P14902 403 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 CPEP16870 476 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 RPL13P26373 211 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 KLRC1P26715 233 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 HNRNPH1P31943 449 aaKnown RBP5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 GUCY2FP51841 1108 aa5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 CCNHP51946 323 aaPredicted RBP5.86□□□□□ -1.47
ECHDC1-206ENST00000417628 GHRHRQ02643 423 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms