RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 PIGVQ9NUD9 493 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 DNAJC17Q9NVM6 304 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 PLK2Q9NYY3 685 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 DLGAP2Q9P1A6 1054 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 CNOT8Q9UFF9 292 aaKnown RBP23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 SCINQ9Y6U3 715 aa23.95■■□□□ 1.42
SMARCB1-205ENST00000417137 GOLGA6L7A0A1B0GV03 622 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 ENDOD1O94919 500 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 GJB6O95452 261 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 TFE3P19532 575 aaPredicted RBP23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 ATP11AP98196 1134 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 MAMLD1Q13495 774 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 CCDC14Q49A88 953 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 FAM133BQ5BKY9 247 aaKnown RBP23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 PIK3R6Q5UE93 754 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 GRAMD4Q6IC98 578 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 TRNP1Q6NT89 227 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 STRADAQ7RTN6 431 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 C12orf40Q86WS4 652 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 DTWD2Q8NBA8 298 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 ZNF653Q96CK0 615 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 MCEEQ96PE7 176 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 SLC2A11Q9BYW1 496 aa23.94■■□□□ 1.42
SMARCB1-205ENST00000417137 A0A0A0MRY4 1105 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 GFRA2O00451 464 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 AKR1B10O60218 316 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 KAT7O95251 611 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 EGFP01133 1207 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 DGKGP49619 791 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 ZNF143P52747 638 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 SLC18A3Q16572 532 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 PPP1R15BQ5SWA1 713 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 OTUD1Q5VV17 481 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 NAIF1Q69YI7 327 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 NADSYN1Q6IA69 706 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 RFWD3Q6PCD5 774 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 BNIPLQ7Z465 357 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 CHSY1Q86X52 802 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 CCDC117Q8IWD4 279 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 ZNF557Q8N988 423 aaPredicted RBP23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 TKTL2Q9H0I9 626 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 CHRDQ9H2X0 955 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 ARHGEF38Q9NXL2 777 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 CALCOCO1Q9P1Z2 691 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 FBXO10Q9UK96 956 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 F5P12259 2224 aa23.93■■□□□ 1.42
SMARCB1-205ENST00000417137 TRIOO75962 3097 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 TBC1D3BA6NDS4 549 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 F5H5T6 163 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 ADCY5O95622 1261 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 TACR2P21452 398 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 SLC6A4P31645 630 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 TNFRSF4P43489 277 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 ARL13BQ3SXY8 428 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 MS4A13Q5J8X5 152 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 TC2NQ8N9U0 490 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 HJURPQ8NCD3 748 aaPredicted RBP23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 CENPIQ92674 756 aaPredicted RBP23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 CNPY3Q9BT09 278 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 NHEJ1Q9H9Q4 299 aaPredicted RBP23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 RBM12Q9NTZ6 932 aaKnown RBP23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 XPO7Q9UIA9 1087 aaKnown RBP23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 COL4A3Q01955 1670 aa23.92■■□□□ 1.42
SMARCB1-205ENST00000417137 TBL1XO60907 577 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 ATG13O75143 517 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 CDC25BP30305 580 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 RPL7AP62424 266 aaKnown RBP23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 KDSRQ06136 332 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 CDO1Q16878 200 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 C15orf59Q2T9L4 293 aaPredicted RBP23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 RAP1GAP2Q684P5 730 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 DNAAF5Q86Y56 855 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 LGI2Q8N0V4 545 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 CHP1Q99653 195 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 ADAM33Q9BZ11 813 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 SPATA6Q9NWH7 488 aaPredicted RBP23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 MYO1AQ9UBC5 1043 aa23.91■■□□□ 1.42
SMARCB1-205ENST00000417137 ATMINO43313 823 aaPredicted RBP23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 PAGE1O75459 146 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 CISD3P0C7P0 127 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 HOXD9P28356 352 aaPredicted RBP23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 MRE11P49959 708 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 NHLH1Q02575 133 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 GFPT1Q06210 699 aaPredicted RBP23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 ASTE1Q2TB18 679 aaPredicted RBP23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 RABGAP1LQ5R372 815 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 MAMSTRQ6ZN01 415 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 SPEM1Q8N4L4 309 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 TERB1Q8NA31 727 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 FAM172AQ8WUF8 416 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 C1orf74Q96LT6 269 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 HAPLN3Q96S86 360 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 IMPACTQ9P2X3 320 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 SLC27A6Q9Y2P4 619 aa23.9■■□□□ 1.42
SMARCB1-205ENST00000417137 TMEM191CA6NGB0 347 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 GOLGA6L6A8MZA4 724 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 K7EQS6 105 aa23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 GALR2O43603 387 aaPredicted RBP23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 TTC39BQ5VTQ0 682 aaPredicted RBP23.89■■□□□ 1.41
SMARCB1-205ENST00000417137 FAM131BQ86XD5 332 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms