RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 TYW5A2RUC4 315 aaKnown RBP16.22■□□□□ 0.19
ITGB1-204ENST00000417122 MAP3K13O43283 966 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 HSF2BPO75031 334 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 GRAP2O75791 330 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 MOCS2O96007 188 aaPredicted RBP16.22■□□□□ 0.19
ITGB1-204ENST00000417122 APOEP02649 317 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 ERBB2P04626 1255 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 NDUFV2P19404 249 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 PITX1P78337 314 aaPredicted RBP16.22■□□□□ 0.19
ITGB1-204ENST00000417122 ARID5AQ03989 594 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 ENPP2Q13822 863 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 ZNF234Q14588 700 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 STARD3Q14849 445 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 SF3A2Q15428 464 aaKnown RBP16.22■□□□□ 0.19
ITGB1-204ENST00000417122 PTPN20Q4JDL3 420 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 ZC3H12AQ5D1E8 599 aaKnown RBP16.22■□□□□ 0.19
ITGB1-204ENST00000417122 FKBP15Q5T1M5 1219 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 CHST9Q7L1S5 443 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 DEFB106AQ8N104 65 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 C12orf50Q8NA57 414 aaPredicted RBP16.22■□□□□ 0.19
ITGB1-204ENST00000417122 TMEM35BQ8NCS4 154 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 ANKRD20A12PQ8NF67 263 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 WFIKKN2Q8TEU8 576 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 SORCS1Q8WY21 1168 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 SLC2A13Q96QE2 648 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 NUCKS1Q9H1E3 243 aaKnown RBP16.22■□□□□ 0.19
ITGB1-204ENST00000417122 GANQ9H2C0 597 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 SMOC1Q9H4F8 434 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 SYNCQ9H7C4 482 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 VPS45Q9NRW7 570 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 ABCB8Q9NUT2 735 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 STIM2Q9P246 746 aa16.22■□□□□ 0.19
ITGB1-204ENST00000417122 MBD1Q9UIS9 605 aaPredicted RBP16.22■□□□□ 0.19
ITGB1-204ENST00000417122 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 BCLAF3A2AJT9 711 aaKnown RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 F8VZ95 297 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 CAVIN2O95810 425 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 CDH5P33151 784 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 DHPSP49366 369 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 KLK7P49862 253 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 COPB1P53618 953 aaKnown RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 CDK17Q00537 523 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 SLC6A3Q01959 620 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 EIF4EBP2Q13542 120 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 AASDHQ4L235 1098 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 MS4A13Q5J8X5 152 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 TAF3Q5VWG9 929 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 RNF43Q68DV7 783 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 OLFML1Q6UWY5 402 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 LPCAT2Q7L5N7 544 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 ERMP1Q7Z2K6 904 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 DGLUCYQ7Z3D6 616 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 KIAA0907Q7Z7F0 614 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 MFN1Q8IWA4 741 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 AHI1Q8N157 1196 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.21■□□□□ 0.192e-8■■■□□ 14.6
ITGB1-204ENST00000417122 ZNF557Q8N988 423 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 HJURPQ8NCD3 748 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 WFDC5Q8TCV5 224 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 NETO1Q8TDF5 533 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 BTN2A3PQ96KV6 586 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 MRGPRX1Q96LB2 322 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 PRICKLE1Q96MT3 831 aaPredicted RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 FAM204AQ9H8W3 233 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 TMEM63CQ9P1W3 806 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 XPO7Q9UIA9 1087 aaKnown RBP16.21■□□□□ 0.19
ITGB1-204ENST00000417122 GGA2Q9UJY4 613 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 CEP192Q8TEP8 1941 aa16.21■□□□□ 0.19
ITGB1-204ENST00000417122 SDK1Q7Z5N4 2213 aa16.21■□□□□ 0.18
ITGB1-204ENST00000417122 SYNJ2BP-COX16A0A087WUM0 186 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 GDF9O60383 454 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 SYNCRIPO60506 623 aaKnown RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 ZNF217O75362 1048 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 PABPC1P11940 636 aaKnown RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 CDK11BP21127 795 aaKnown RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 ATXN1P54253 815 aaKnown RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 POLR2FP61218 127 aaKnown RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 RPS24P62847 133 aaKnown RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 TYRO3Q06418 890 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 FUT11Q495W5 492 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 SPDYCQ5MJ68 293 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 SERPINA13PQ6UXR4 307 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 SLC26A9Q7LBE3 791 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 CYP2U1Q7Z449 544 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 NOP9Q86U38 636 aaKnown RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 ADIPOR2Q86V24 386 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 ZDHHC17Q8IUH5 632 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 TMEFF1Q8IYR6 380 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 ATP6V0D2Q8N8Y2 350 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 DDX1Q92499 740 aaKnown RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 MYEOVQ96EZ4 313 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 RTKNQ9BST9 563 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 SLC6A17Q9H1V8 727 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 FAM207AQ9NSI2 230 aaPredicted RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 DDIT4Q9NX09 232 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 COX16Q9P0S2 106 aa16.2■□□□□ 0.18
ITGB1-204ENST00000417122 LIMA1Q9UHB6 759 aaKnown RBP16.2■□□□□ 0.18
ITGB1-204ENST00000417122 SLC12A6Q9UHW9 1150 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms