RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 SETSIPP0DME0 302 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 C7P10643 843 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 TBXAS1P24557 533 aaPredicted RBP15.45■□□□□ 0.06
RPS28-201ENST00000417088 DAOAP59103 153 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 ZNF445P59923 1031 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 BNC1Q01954 994 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 LCLAT1Q6UWP7 414 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 CHST9Q7L1S5 443 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 KIAA0907Q7Z7F0 614 aaPredicted RBP15.45■□□□□ 0.06
RPS28-201ENST00000417088 ADIPOR2Q86V24 386 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 FAM124AQ86V42 546 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.45■□□□□ 0.06
RPS28-201ENST00000417088 C1orf216Q8TAB5 229 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 SPATA20Q8TB22 786 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 WFIKKN2Q8TEU8 576 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 CYB5D2Q8WUJ1 264 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 ERCC4Q92889 916 aaPredicted RBP15.45■□□□□ 0.06
RPS28-201ENST00000417088 IL21RQ9HBE5 538 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 ABCB8Q9NUT2 735 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 EIF2B4Q9UI10 523 aaKnown RBP15.45■□□□□ 0.06
RPS28-201ENST00000417088 PCDHB9Q9Y5E1 797 aa15.45■□□□□ 0.06
RPS28-201ENST00000417088 NUMA1Q14980 2115 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 BCAT2O15382 392 aaPredicted RBP15.44■□□□□ 0.06
RPS28-201ENST00000417088 CBFA2T3O75081 653 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 PABPC1P11940 636 aaKnown RBP15.44■□□□□ 0.06
RPS28-201ENST00000417088 LCP1P13796 627 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 RGS7P49802 495 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 SGSHP51688 502 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 LRRC63Q05C16 580 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 PTPRNQ16849 979 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 FNDC3BQ53EP0 1204 aaKnown RBP15.44■□□□□ 0.06
RPS28-201ENST00000417088 MSANTD2Q6P1R3 559 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 ZNF366Q8N895 744 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 ENGASEQ8NFI3 743 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 SLC35F5Q8WV83 523 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 ZSWIM1Q9BR11 485 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 PCED1AQ9H1Q7 454 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 LHX5Q9H2C1 402 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 GAREM1Q9H706 876 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 GGA2Q9UJY4 613 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 PLA2G4CQ9UP65 541 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 DMXL2Q8TDJ6 3036 aa15.44■□□□□ 0.06
RPS28-201ENST00000417088 GOLGA6L7A0A1B0GV03 622 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 RNF225M0QZC1 329 aaPredicted RBP15.43■□□□□ 0.06
RPS28-201ENST00000417088 SMC2O95347 1197 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 IGLV3-27P01718 113 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 PAEPP09466 180 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 FTH1P19P0C7X4 201 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 ACSL1P33121 698 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 MATKP42679 507 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 FMO5P49326 533 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 CNGA2Q16280 664 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 MPP7Q5T2T1 576 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 MBLAC2Q68D91 279 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 PMF1Q6P1K2 205 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 RFWD3Q6PCD5 774 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 TMEM270Q6UE05 265 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 AHI1Q8N157 1196 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 PNPLA1Q8N8W4 532 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 WFDC5Q8TCV5 224 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 ADAMTS14Q8WXS8 1223 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 IRGQQ8WZA9 623 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 KAT5Q92993 513 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 C6orf106Q9H6K1 298 aaPredicted RBP15.43■□□□□ 0.06
RPS28-201ENST00000417088 PRSS16Q9NQE7 514 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 PCOLCE2Q9UKZ9 415 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 SLCO1B1Q9Y6L6 691 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 CABIN1Q9Y6J0 2220 aa15.43■□□□□ 0.06
RPS28-201ENST00000417088 PIK3R2O00459 728 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 TBL1XO60907 577 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 CER1O95813 267 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 CAPNS1P04632 268 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 DLDP09622 509 aaKnown RBP15.42■□□□□ 0.06
RPS28-201ENST00000417088 ZNF883P0CG24 379 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 CD70P32970 193 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 RPS14P62263 151 aaKnown RBP15.42■□□□□ 0.06
RPS28-201ENST00000417088 HLA-BQ31612 363 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 FAM133BQ5BKY9 247 aaKnown RBP15.42■□□□□ 0.06
RPS28-201ENST00000417088 PIK3R6Q5UE93 754 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 IL27RAQ6UWB1 636 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 GLRX5Q86SX6 157 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 SMARCE1Q969G3 411 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 NT5C1BQ96P26 610 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 IRX2Q9BZI1 471 aaPredicted RBP15.42■□□□□ 0.06
RPS28-201ENST00000417088 METTL14Q9HCE5 456 aaKnown RBP15.42■□□□□ 0.06
RPS28-201ENST00000417088 TM7SF3Q9NS93 570 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.42■□□□□ 0.06
RPS28-201ENST00000417088 FNDC3AQ9Y2H6 1198 aaKnown RBP15.42■□□□□ 0.06
RPS28-201ENST00000417088 PCDHB4Q9Y5E5 795 aa15.42■□□□□ 0.06
RPS28-201ENST00000417088 A0A1B0GVT2 93 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 TAF4O00268 1085 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 PMM2O15305 246 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 ACSL4O60488 711 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 CALCAP01258 141 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 LTFP02788 710 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 ATP5BP06576 529 aaKnown RBP15.41■□□□□ 0.06
RPS28-201ENST00000417088 BRD2P25440 801 aaKnown RBP15.41■□□□□ 0.06
RPS28-201ENST00000417088 SLC6A4P31645 630 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 SLC11A2P49281 568 aa15.41■□□□□ 0.06
RPS28-201ENST00000417088 CSNK1EP49674 416 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms