RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 RIMS3Q9UJD0 308 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 CDC14AQ9UNH5 594 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 RNF11Q9Y3C5 154 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 TEX264Q9Y6I9 313 aa15.13■□□□□ 0.01
NCKIPSD-204ENST00000416649 PSMD12O00232 456 aaPredicted RBP15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 NEMP1O14524 444 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZBTB14O43829 449 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 GMPRP36959 345 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 MAPK10P53779 464 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 TNFAIP1Q13829 316 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 SEPT6Q14141 434 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 GPR141Q7Z602 305 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 ALDH16A1Q8IZ83 802 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 SLC7A5P1Q8MH63 180 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 ABRAQ8N0Z2 381 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 CENPSQ8N2Z9 138 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 ADCY4Q8NFM4 1077 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 MPHOSPH6Q99547 160 aaKnown RBP15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 RNPEPQ9H4A4 650 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 KCND2Q9NZV8 630 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 SLC9A2Q9UBY0 812 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 COQ4Q9Y3A0 265 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 TTLL3Q9Y4R7 772 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 FADS3Q9Y5Q0 445 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 WDR64B1ANS9 1081 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 STX16-NPEPL1H3BU86 382 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 PAX3P23760 479 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 ESRRGP62508 458 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 GCNT1Q02742 428 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 SEZ6Q53EL9 994 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 N4BP2L1Q5TBK1 243 aaPredicted RBP15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 TRMT10BQ6PF06 316 aaKnown RBP15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 NPNTQ6UXI9 565 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 ADGRF2Q8IZF7 708 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 ADAM32Q8TC27 787 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 ATP2A3Q93084 1043 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 C12orf43Q96C57 262 aaKnown RBP15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 SERPINI1Q99574 410 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 STK39Q9UEW8 545 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 MYRFQ9Y2G1 1151 aa15.12■□□□□ 0.01
NCKIPSD-204ENST00000416649 TMEM191CA6NGB0 347 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 MCF2LO15068 1137 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 SEC24DO94855 1032 aaPredicted RBP15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 H6PDO95479 791 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 TMEM191BP0C7N4 346 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 CDH3P22223 829 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 SLC2A7Q6PXP3 512 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 DCDC5Q6ZRR9 648 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 MIER3Q7Z3K6 550 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 SNX32Q86XE0 403 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 SPATA18Q8TC71 538 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 ATG4CQ96DT6 458 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 RMND5BQ96G75 393 aaPredicted RBP15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 BIRC8Q96P09 236 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 TEKT3Q9BXF9 490 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 WDR11Q9BZH6 1224 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 TBC1D22BQ9NU19 505 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 TMED5Q9Y3A6 229 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 RGPD3A6NKT7 1758 aaPredicted RBP15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 RGPD4Q7Z3J3 1758 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 NDUFB5O43674 189 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 APRTP07741 180 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 HMOX2P30519 316 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 PPARGP37231 505 aaPredicted RBP15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 MS4A2Q01362 244 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 KLF10Q13118 480 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 TMEM214Q6NUQ4 689 aaKnown RBP15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 PPP1R2P3Q6NXS1 205 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZNF677Q86XU0 584 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 ISOC1Q96CN7 298 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 PLEKHA8Q96JA3 519 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 TRPC7Q9HCX4 862 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 SLC17A6Q9P2U8 582 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 AFG3L2Q9Y4W6 797 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 RIPK3Q9Y572 518 aa15.11■□□□□ 0.01
NCKIPSD-204ENST00000416649 C7orf72A4D263 438 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 H7C0C1 242 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 OXSR1O95747 527 aaPredicted RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 ATP5BP06576 529 aaKnown RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 ATP5OP48047 213 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 PSMC1P62191 440 aaKnown RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 LZTR1Q8N653 840 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 MTMR14Q8NCE2 650 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 TRPV6Q9H1D0 765 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 COQ10BQ9H8M1 238 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 TMEM98Q9Y2Y6 226 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 ZBED1O96006 694 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 L1CAMP32004 1257 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 HSPA13P48723 471 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 TRIM72Q6ZMU5 477 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 BNC2Q6ZN30 1099 aaPredicted RBP15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 ATG14Q6ZNE5 492 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 ENOSF1Q7L5Y1 443 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 C10orf107Q8IVU9 208 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 C12orf56Q8IXR9 622 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 DEPDC1BQ8WUY9 529 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 RANBP9Q96S59 729 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 SGIP1Q9BQI5 828 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 NEURL2Q9BR09 285 aa15.1■□□□□ 0.01
NCKIPSD-204ENST00000416649 KLC2Q9H0B6 622 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms