RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 NTAN1Q96AB6 310 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 ATG2BQ96BY7 2078 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 MYEOVQ96EZ4 313 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 ASIC4Q96FT7 647 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 BTN2A3PQ96KV6 586 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 PLA2G2FQ9BZM2 168 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 TRPV4Q9HBA0 871 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 EPS15L1Q9UBC2 864 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 WNT6Q9Y6F9 365 aa13.59□□□□□ -0.23
CNOT4-204ENST00000414802 FAM72CH0Y354 149 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 FANCGO15287 622 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 DDX3YO15523 660 aaKnown RBP13.58□□□□□ -0.24
CNOT4-204ENST00000414802 PSTPIP1O43586 416 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 ACSL4O60488 711 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 SLC6A4P31645 630 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 CTNNA1P35221 906 aaKnown RBP13.58□□□□□ -0.24
CNOT4-204ENST00000414802 SCAPQ12770 1279 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 ARL13BQ3SXY8 428 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 PPP6R3Q5H9R7 873 aaPredicted RBP13.58□□□□□ -0.24
CNOT4-204ENST00000414802 MS4A13Q5J8X5 152 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 ERMARDQ5T6L9 678 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 MEI1Q5TIA1 1274 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 FAM72AQ5TYM5 149 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 FAM72DQ6L9T8 149 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 C14orf80Q86SX3 495 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 FAM72BQ86X60 149 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 RSAD2Q8WXG1 361 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 ALG3Q92685 438 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 ZFYVE19Q96K21 471 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 PSMB7Q99436 277 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 NCAPGQ9BPX3 1015 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 RPP25Q9BUL9 199 aaKnown RBP13.58□□□□□ -0.24
CNOT4-204ENST00000414802 DCLK3Q9C098 648 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 ZFP14Q9HCL3 533 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 NUMBLQ9Y6R0 609 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 NCOR1O75376 2440 aa13.58□□□□□ -0.24
CNOT4-204ENST00000414802 MYO18AQ92614 2054 aaKnown RBP13.57□□□□□ -0.24
CNOT4-204ENST00000414802 E2F8A0AVK6 867 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 TSPAN3O60637 253 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 ATP1A1P05023 1023 aaKnown RBP13.57□□□□□ -0.24
CNOT4-204ENST00000414802 KRT7P08729 469 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 CD48P09326 243 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 TCF3P15923 654 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 TACR2P21452 398 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 CTNNA2P26232 953 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 SLC11A2P49281 568 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 IRAK1P51617 712 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 CDH6P55285 790 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 HTR4Q13639 388 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 KRT81Q14533 505 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 TRIM68Q6AZZ1 485 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 NYAP1Q6ZVC0 841 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 HTR3DQ70Z44 454 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 CIR1Q86X95 450 aaPredicted RBP13.57□□□□□ -0.24
CNOT4-204ENST00000414802 BPIFB1Q8TDL5 484 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 TEKT4Q8WW24 435 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 RAPGEF5Q92565 580 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 HES6Q96HZ4 224 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 TLR10Q9BXR5 811 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 SLC12A6Q9UHW9 1150 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 VANGL2Q9ULK5 521 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 NR2E1Q9Y466 385 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 ZFP37Q9Y6Q3 630 aaPredicted RBP13.57□□□□□ -0.24
CNOT4-204ENST00000414802 F5P12259 2224 aa13.57□□□□□ -0.24
CNOT4-204ENST00000414802 LRRD1A4D1F6 860 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 CREB3O43889 395 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 SGSHP51688 502 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 LLGL1Q15334 1064 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 BOLA3Q53S33 107 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 DCAF12L1Q5VU92 463 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 AADACL2Q6P093 401 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 MTSS1LQ765P7 747 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 POLNQ7Z5Q5 900 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 LGI2Q8N0V4 545 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 BHMTQ93088 406 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 RNF25Q96BH1 459 aaPredicted RBP13.56□□□□□ -0.24
CNOT4-204ENST00000414802 PRICKLE1Q96MT3 831 aaPredicted RBP13.56□□□□□ -0.24
CNOT4-204ENST00000414802 HAPLN3Q96S86 360 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 PRMT1Q99873 361 aaKnown RBP13.56□□□□□ -0.24
CNOT4-204ENST00000414802 LINC00597Q9H2U6 94 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 PCDH18Q9HCL0 1135 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 PCDHA3Q9Y5H8 950 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 CCDC66A2RUB6 948 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 MIF4GDA9UHW6 222 aaKnown RBP13.56□□□□□ -0.24
CNOT4-204ENST00000414802 SRGAP2O75044 1071 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 ARSAP15289 507 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 L1CAMP32004 1257 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 IFNAR2P48551 515 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 PEX5P50542 639 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 AIF1P55008 147 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 ZNF211Q13398 564 aaPredicted RBP13.56□□□□□ -0.24
CNOT4-204ENST00000414802 AUHQ13825 339 aaKnown RBP13.56□□□□□ -0.24
CNOT4-204ENST00000414802 RPS6KA1Q15418 735 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 DPYSL2Q16555 572 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 PUS10Q3MIT2 529 aaKnown RBP13.56□□□□□ -0.24
CNOT4-204ENST00000414802 LRRC38Q5VT99 294 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 SYT10Q6XYQ8 523 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 ANKS1BQ7Z6G8 1248 aa13.56□□□□□ -0.24
CNOT4-204ENST00000414802 UBL4BQ8N7F7 174 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms