RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 MPPE1Q53F39 396 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 FAM133BQ5BKY9 247 aaKnown RBP13.12□□□□□ -0.31
ZNF3-204ENST00000412947 MS4A13Q5J8X5 152 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
ZNF3-204ENST00000412947 IER5LQ5T953 404 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 RAP1GAP2Q684P5 730 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 NADSYN1Q6IA69 706 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 ZNF852Q6ZMS4 543 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 SLC35G2Q8TBE7 412 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 FAM3CQ92520 227 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 BHMTQ93088 406 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 TMA16Q96EY4 203 aaKnown RBP13.12□□□□□ -0.31
ZNF3-204ENST00000412947 HAPLN3Q96S86 360 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 IRX2Q9BZI1 471 aaPredicted RBP13.12□□□□□ -0.31
ZNF3-204ENST00000412947 SIK2Q9H0K1 926 aa13.12□□□□□ -0.31
ZNF3-204ENST00000412947 MRPS17Q9Y2R5 130 aaKnown RBP13.12□□□□□ -0.31
ZNF3-204ENST00000412947 TMEM221A6NGB7 291 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.11□□□□□ -0.31
ZNF3-204ENST00000412947 M0R296 226 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 STK25O00506 426 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 PRPSAP2O60256 369 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 TYRP14679 529 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 SLC6A4P31645 630 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 ADRA1BP35368 520 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 NOP2P46087 812 aaKnown RBP13.11□□□□□ -0.31
ZNF3-204ENST00000412947 AIF1P55008 147 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 RAB6CQ53S08 254 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 EFHC2Q5JST6 749 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 RABGAP1LQ5R372 815 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 PIK3R6Q5UE93 754 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 RFWD3Q6PCD5 774 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 SLFN11Q7Z7L1 901 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 CCDC117Q8IWD4 279 aaPredicted RBP13.11□□□□□ -0.31
ZNF3-204ENST00000412947 LGI2Q8N0V4 545 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 NIPA2Q8N8Q9 360 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 HJURPQ8NCD3 748 aaPredicted RBP13.11□□□□□ -0.31
ZNF3-204ENST00000412947 ACRBPQ8NEB7 543 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 NTAN1Q96AB6 310 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 BTBD6Q96KE9 485 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 XPO6Q96QU8 1125 aaKnown RBP13.11□□□□□ -0.31
ZNF3-204ENST00000412947 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 RAB6CQ9H0N0 254 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 OSGEPQ9NPF4 335 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 PLK2Q9NYY3 685 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 HS3ST4Q9Y661 456 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 TICRRQ7Z2Z1 1910 aa13.11□□□□□ -0.31
ZNF3-204ENST00000412947 TMEM110-MUSTN1A8MSY1 372 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 CACNG3O60359 315 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 TBL1XO60907 577 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 MTA2O94776 668 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 PENKP01210 267 aaPredicted RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 MIPP30301 263 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 PCK1P35558 622 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 EIF2DP41214 584 aaKnown RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 ARHGAP25P42331 645 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 SSR1P43307 286 aaKnown RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 VAV2P52735 878 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 STARD6P59095 220 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 AUHQ13825 339 aaKnown RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 TCEAL1Q15170 157 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 GAB4Q2WGN9 574 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 PREPLQ4J6C6 727 aaPredicted RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 MPP7Q5T2T1 576 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 TTC39BQ5VTQ0 682 aaPredicted RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 FYB2Q5VWT5 728 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 LRRC31Q6UY01 552 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 CCDC185Q8N715 623 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 NAT16Q8N8M0 369 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 CD101Q93033 1021 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 PDLIM2Q96JY6 352 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 C1orf74Q96LT6 269 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 PRICKLE1Q96MT3 831 aaPredicted RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 PRMT1Q99873 361 aaKnown RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 P2RY13Q9BPV8 354 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 EPHX3Q9H6B9 360 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 TBC1D17Q9HA65 648 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 ANLNQ9NQW6 1124 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 TMPRSS4Q9NRS4 437 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 DNAJC17Q9NVM6 304 aaKnown RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 PCSK1NQ9UHG2 260 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 VANGL2Q9ULK5 521 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 REXO2Q9Y3B8 237 aaKnown RBP13.1□□□□□ -0.31
ZNF3-204ENST00000412947 COL4A2P08572 1712 aa13.1□□□□□ -0.31
ZNF3-204ENST00000412947 A0A0A6YYK5 440 aaPredicted RBP13.09□□□□□ -0.31
ZNF3-204ENST00000412947 KANSL1LA0AUZ9 987 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 I6L893 689 aaPredicted RBP13.09□□□□□ -0.31
ZNF3-204ENST00000412947 GFRA2O00451 464 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 TULP3O75386 442 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 LRCH4O75427 683 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 PROSCO94903 275 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 MAN1A1P33908 653 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 GGCXP38435 758 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 OPRD1P41143 372 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 SGSHP51688 502 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 RPS24P62847 133 aaKnown RBP13.09□□□□□ -0.31
ZNF3-204ENST00000412947 CCZ1BP86790 482 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 CCZ1P86791 482 aaPredicted RBP13.09□□□□□ -0.31
ZNF3-204ENST00000412947 SCAPQ12770 1279 aa13.09□□□□□ -0.31
ZNF3-204ENST00000412947 GRSF1Q12849 480 aaKnown RBP eCLIP13.09□□□□□ -0.31
ZNF3-204ENST00000412947 MESDQ14696 234 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms