RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 DUSP10Q9Y6W6 482 aa5.38□□□□□ -1.55
HERC4-205ENST00000412272 PMS2P1A4D2B8 440 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT1A9O60656 530 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SLITRK3O94933 977 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 STAU1O95793 577 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT1A6P19224 532 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT1A1P22309 533 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT1A4P22310 534 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 FGFR4P22455 802 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 GRK2P25098 689 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 CTHP32929 405 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT1A3P35503 534 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT1A5P35504 534 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ST13P50502 369 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 UBE3AQ05086 875 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 BTKQ06187 659 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ASPHQ12797 758 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 IDI1Q13907 227 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TRIM16LQ309B1 348 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 C5orf22Q49AR2 442 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SFT2D3Q587I9 215 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 KRBOX4Q5JUW0 171 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 C6orf10Q5SRN2 563 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 CLEC2AQ6UVW9 174 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 GLYCTKQ8IVS8 523 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 C2orf69Q8N8R5 385 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 FANCBQ8NB91 859 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PSPC1Q8WXF1 523 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 FBXW5Q969U6 566 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 CCDC120Q96HB5 630 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 CSRNP2Q9H175 543 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT1A7Q9HAW7 530 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT1A10Q9HAW8 530 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT1A8Q9HAW9 530 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PRDM11Q9NQV5 511 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ZNF275Q9NSD4 429 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 TAGLN3Q9UI15 199 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 DNMT3LQ9UJW3 386 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ANGPTL2Q9UKU9 493 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 LRFN2Q9ULH4 789 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SPATA2Q9UM82 520 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 UGT2A1Q9Y4X1 527 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 MRPL42Q9Y6G3 142 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 BCORQ6W2J9 1755 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 C10orf71Q711Q0 1435 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 FAM196BA6NMK8 535 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TARM1B6A8C7 271 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 K7ENM7 598 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 KPNA4O00629 521 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 POLR2DO15514 142 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 CCNT2O60583 730 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 TOM1O60784 492 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ZNF623O75123 536 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SLITRK5O94991 958 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 MOCS3O95396 460 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 BMP15O95972 392 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ANPEPP15144 967 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TTKP33981 857 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 RFC4P35249 363 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SERPINB5P36952 375 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 KCNJ5P48544 419 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ARHGAP4P98171 946 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SETMARQ53H47 684 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 HTR3DQ70Z44 454 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 EEPD1Q7L9B9 569 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 BNIPLQ7Z465 357 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 OR52N1Q8NH53 320 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 WDR48Q8TAF3 677 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 DENND1AQ8TEH3 1009 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 GRK7Q8WTQ7 553 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 RAPGEF4Q8WZA2 1011 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 KRT12Q99456 494 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ANKRD2Q9GZV1 360 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 IARS2Q9NSE4 1012 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 GDAP2Q9NXN4 497 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 KLHL14Q9P2G3 628 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 RPS6KA6Q9UK32 745 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PITPNM2Q9BZ72 1349 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PCDH17O14917 1159 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SLC7A4O43246 635 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TP53P04637 393 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 CLEC2LP0C7M8 214 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TOB1P50616 345 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 LAMC2Q13753 1193 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 DMC1Q14565 340 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TAF5Q15542 800 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 KRT79Q5XKE5 535 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 KRT40Q6A162 431 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 ITPRIPL1Q6GPH6 555 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 NSMFQ6X4W1 530 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 PROSER2Q86WR7 435 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 CPNE9Q8IYJ1 553 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TERB1Q8NA31 727 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SIMC1Q8NDZ2 872 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SCFD1Q8WVM8 642 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 TRUB1Q8WWH5 349 aaKnown RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 EAF2Q96CJ1 260 aaPredicted RBP5.37□□□□□ -1.55
HERC4-205ENST00000412272 TOX2Q96NM4 488 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 SLC2A13Q96QE2 648 aa5.37□□□□□ -1.55
HERC4-205ENST00000412272 NACC1Q96RE7 527 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms