RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 UBXN1Q04323 297 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 PLP2Q04941 152 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 FHL3Q13643 280 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 THOC5Q13769 683 aaKnown RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 CRYMQ14894 314 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 MED22Q15528 200 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 P3H1Q32P28 736 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 PTCHD3Q3KNS1 767 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 SPATS1Q496A3 300 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 LRRC24Q50LG9 513 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 DNAJC21Q5F1R6 531 aaKnown RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 ZNF766Q5HY98 468 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 C11orf88Q6PI97 169 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 DENND5BQ6ZUT9 1274 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 RAPH1Q70E73 1250 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 ADGRG6Q86SQ4 1221 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 SDCCAG8Q86SQ7 713 aaPredicted RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 CMTM4Q8IZR5 234 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 NUP93Q8N1F7 819 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 NAT8LQ8N9F0 302 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 ANKRD53Q8N9V6 530 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 RFWD2Q8NHY2 731 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 CCDC47Q96A33 483 aaKnown RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 CCDC34Q96HJ3 373 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 REXO5Q96IC2 774 aaKnown RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 CD180Q99467 661 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 PIP5K1AQ99755 562 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 OR10A2Q9H208 303 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 SEC61A2Q9H9S3 476 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 PCDHB16Q9NRJ7 776 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 DECR2Q9NUI1 292 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 ALKBH4Q9NXW9 302 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 EHD2Q9NZN4 543 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 NCDNQ9UBB6 729 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 ZNF70Q9UC06 446 aaPredicted RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 ODF2LQ9ULJ1 636 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 TMCC3Q9ULS5 477 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 PA2G4Q9UQ80 394 aaKnown RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 HDAC5Q9UQL6 1122 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 DRG1Q9Y295 367 aaKnown RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 NEU2Q9Y3R4 380 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 ENTPD2Q9Y5L3 495 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 LOC105369274A0A096LPK9 316 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 LOC102723532A0A0G2JNH3 316 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 MBD3L5A6NJ08 208 aaPredicted RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 FAM90A7PA6NKC0 464 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 A8MV72 311 aaPredicted RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 FAM90A22PA8MWA6 464 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 FAM90A12PA8MX19 464 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 FAM90A23PA8MXZ1 464 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 TP73O15350 636 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 BCAT2O15382 392 aaPredicted RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 CBFA2T3O75081 653 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 ENTPD3O75355 529 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 PDE8BO95263 885 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 ATP5BP06576 529 aaKnown RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 CHN1P15882 459 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 ICAM3P32942 547 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 HNF4AP41235 474 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 PDE6CP51160 858 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 ADCY7P51828 1080 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 ZNF134P52741 427 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 EIF3BP55884 814 aaKnown RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 ATP2C1P98194 919 aaPredicted RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 RNASELQ05823 741 aaKnown RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 PIGFQ07326 219 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 EIF2B5Q13144 721 aaKnown RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 ADIPOQQ15848 244 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 MMEL1Q495T6 779 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 RAB41Q5JT25 222 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 CERCAMQ5T4B2 595 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 ATXN7L2Q5T6C5 722 aaPredicted RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 SLFN13Q68D06 897 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 TMEM154Q6P9G4 183 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 DCLRE1AQ6PJP8 1040 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 PIK3AP1Q6ZUJ8 805 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 RAB11FIP4Q86YS3 637 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 SCN4BQ8IWT1 228 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 KIAA2013Q8IYS2 634 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 CCDC170Q8IYT3 715 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 OR4N4Q8N0Y3 316 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 TEX9Q8N6V9 391 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 POMGNT2Q8NAT1 580 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 PSD4Q8NDX1 1056 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 GPR150Q8NGU9 434 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 SUN3Q8TAQ9 357 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 GDAP1Q8TB36 358 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 NOC3LQ8WTT2 800 aaKnown RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 RUFY2Q8WXA3 655 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 PGAP3Q96FM1 320 aaPredicted RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 MASTLQ96GX5 879 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 SPAG5Q96R06 1193 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 FNBP1Q96RU3 617 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 MYCBPQ99417 103 aaPredicted RBP5.27□□□□□ -1.57
LSM5-205ENST00000409952 SMOQ99835 787 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 APOL6Q9BWW8 343 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 C1QTNF3Q9BXJ4 246 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 CARD11Q9BXL7 1154 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 TEX12Q9BXU0 123 aa5.27□□□□□ -1.57
LSM5-205ENST00000409952 TTYH1Q9H313 450 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms