RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 TCEAL6Q6IPX3 200 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 ERMP1Q7Z2K6 904 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 DGLUCYQ7Z3D6 616 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 KIAA0907Q7Z7F0 614 aaPredicted RBP18.39■□□□□ 0.53
LSM5-204ENST00000409909 ADIPOR2Q86V24 386 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 TMEFF1Q8IYR6 380 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 UCMAQ8WVF2 138 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 TCEAL3Q969E4 200 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 MRGPRX1Q96LB2 322 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 PRICKLE1Q96MT3 831 aaPredicted RBP18.39■□□□□ 0.53
LSM5-204ENST00000409909 SLC2A13Q96QE2 648 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 CIPCQ9C0C6 399 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 NUCKS1Q9H1E3 243 aaKnown RBP18.39■□□□□ 0.53
LSM5-204ENST00000409909 VPS45Q9NRW7 570 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 ABCB8Q9NUT2 735 aa18.39■□□□□ 0.53
LSM5-204ENST00000409909 NCOR2Q9Y618 2525 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 NPC1O15118 1278 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 IRAK2O43187 625 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 MAP3K13O43283 966 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 TIMM44O43615 452 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 FOXD2O60548 495 aaPredicted RBP18.38■□□□□ 0.53
LSM5-204ENST00000409909 GRAP2O75791 330 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 CAVIN2O95810 425 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 CYP11B1P15538 503 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 SDHBP21912 280 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 KLK7P49862 253 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 BPIFB4P59827 614 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 BYSLQ13895 437 aaKnown RBP18.38■□□□□ 0.53
LSM5-204ENST00000409909 FUT11Q495W5 492 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 PTPN20Q4JDL3 420 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 DCAF6Q58WW2 860 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 SASS6Q6UVJ0 657 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 OLFML1Q6UWY5 402 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 FAM183BPQ6ZVS7 135 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 DEFB106AQ8N104 65 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.38■□□□□ 0.53
LSM5-204ENST00000409909 NETO1Q8TDF5 533 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 DDX1Q92499 740 aaKnown RBP18.38■□□□□ 0.53
LSM5-204ENST00000409909 LMLNQ96KR4 655 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 SPACA7Q96KW9 195 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 IRX2Q9BZI1 471 aaPredicted RBP18.38■□□□□ 0.53
LSM5-204ENST00000409909 CD93Q9NPY3 652 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 ANO10Q9NW15 660 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 ASNSD1Q9NWL6 643 aa18.38■□□□□ 0.53
LSM5-204ENST00000409909 MOCS2O96007 188 aaPredicted RBP18.37■□□□□ 0.53
LSM5-204ENST00000409909 GLI1P08151 1106 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 PRKCHP24723 683 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 CD70P32970 193 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 PTGER3P43115 390 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 DHPSP49366 369 aaPredicted RBP18.37■□□□□ 0.53
LSM5-204ENST00000409909 RPS24P62847 133 aaKnown RBP18.37■□□□□ 0.53
LSM5-204ENST00000409909 MS4A13Q5J8X5 152 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 EFHC1Q5JVL4 640 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 OR6B2Q6IFH4 312 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 CHST9Q7L1S5 443 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 LPCAT2Q7L5N7 544 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 C12orf50Q8NA57 414 aaPredicted RBP18.37■□□□□ 0.53
LSM5-204ENST00000409909 NOX5Q96PH1 765 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 STK33Q9BYT3 514 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 MKRN2Q9H000 416 aaKnown RBP18.37■□□□□ 0.53
LSM5-204ENST00000409909 GANQ9H2C0 597 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 STIM2Q9P246 746 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 GGA2Q9UJY4 613 aa18.37■□□□□ 0.53
LSM5-204ENST00000409909 IGHV1OR15-9A0A0B4J2B8 117 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 FAM170AA1A519 330 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 DCDC2BA2VCK2 349 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 F8VZ95 297 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 SLC30A4O14863 429 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 EPHB6O15197 1021 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 ZBTB24O43167 697 aaPredicted RBP18.36■□□□□ 0.53
LSM5-204ENST00000409909 HSF2BPO75031 334 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 MBD3O95983 291 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 PABPC1P11940 636 aaKnown RBP18.36■□□□□ 0.53
LSM5-204ENST00000409909 CDH5P33151 784 aaPredicted RBP18.36■□□□□ 0.53
LSM5-204ENST00000409909 SLC6A3Q01959 620 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 CKAP5Q14008 2032 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 STARD3Q14849 445 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 STX1AQ16623 288 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 AASDHQ4L235 1098 aaPredicted RBP18.36■□□□□ 0.53
LSM5-204ENST00000409909 CCDC183Q5T5S1 534 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 TAF3Q5VWG9 929 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 ARMCX6Q7L4S7 300 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 CYP2U1Q7Z449 544 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 NOP9Q86U38 636 aaKnown RBP18.36■□□□□ 0.53
LSM5-204ENST00000409909 CFAP52Q8N1V2 620 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 HJURPQ8NCD3 748 aaPredicted RBP18.36■□□□□ 0.53
LSM5-204ENST00000409909 WFIKKN2Q8TEU8 576 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 CYB5D2Q8WUJ1 264 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 DDX50Q9BQ39 737 aaKnown RBP18.36■□□□□ 0.53
LSM5-204ENST00000409909 RTKNQ9BST9 563 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 HSD3B7Q9H2F3 369 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 CYP8B1Q9UNU6 501 aa18.36■□□□□ 0.53
LSM5-204ENST00000409909 TNRC6BQ9UPQ9 1833 aaKnown RBP18.36■□□□□ 0.53
LSM5-204ENST00000409909 CEP192Q8TEP8 1941 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 KCNU1A8MYU2 1149 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 PATE3B3GLJ2 98 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 APOEP02649 317 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 HLA-EP13747 358 aa18.35■□□□□ 0.53
LSM5-204ENST00000409909 CDK17Q00537 523 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms