RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 DAB2IPQ5VWQ8 1189 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 DENND1BQ6P3S1 775 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 ZDHHC17Q8IUH5 632 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 AHI1Q8N157 1196 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 RLN3Q8WXF3 142 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 FOXJ1Q92949 421 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 SLC39A13Q96H72 371 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 MRGPRX1Q96LB2 322 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 NUSAP1Q9BXS6 441 aaKnown RBP15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 PRDM16Q9HAZ2 1276 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 ZDHHC4Q9NPG8 344 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 ITM2CQ9NQX7 267 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 LMBRD1Q9NUN5 540 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 CACNA2D2Q9NY47 1150 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 CALCOCO1Q9P1Z2 691 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 DNAJC12Q9UKB3 198 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 NFE2L3Q9Y4A8 694 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 CEP83Q9Y592 693 aa15.11■□□□□ 0.01
NIF3L1-205ENST00000409588 DCDC2BA2VCK2 349 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 BECN2A8MW95 431 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 PAPSS1O43252 624 aaPredicted RBP15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 NDUFV2P19404 249 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 BCKDHBP21953 392 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 WASP42768 502 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 RPL6Q02878 288 aaKnown RBP15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 DPCR1Q3MIW9 517 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 SYCP2LQ5T4T6 812 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 PEAR1Q5VY43 1037 aaPredicted RBP15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 LYSMD4Q5XG99 296 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 SLC23A3Q6PIS1 610 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 KDM1BQ8NB78 822 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 HJURPQ8NCD3 748 aaPredicted RBP15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 FIBINQ8TAL6 211 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 ENOX1Q8TC92 643 aaKnown RBP15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 DQX1Q8TE96 717 aaKnown RBP15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 CLEC4CQ8WTT0 213 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 PIGKQ92643 395 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 ZNF419Q96HQ0 510 aaPredicted RBP15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 PPP1R13BQ96KQ4 1090 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 BTN2A3PQ96KV6 586 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 PPP1R9BQ96SB3 815 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 CIPCQ9C0C6 399 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 RRN3Q9NYV6 651 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 SUN2Q9UH99 717 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 MBD1Q9UIS9 605 aaPredicted RBP15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 DAAM1Q9Y4D1 1078 aa15.1■□□□□ 0.01
NIF3L1-205ENST00000409588 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 WASH3PC4AMC7 463 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 E5RJQ4 531 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 PIK3R2O00459 728 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 MSI1O43347 362 aaKnown RBP15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 TSPAN3O60637 253 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 NDUFS2O75306 463 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 APOEP02649 317 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 TPM2P07951 284 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 DLDP09622 509 aaKnown RBP15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 HLA-FP30511 346 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 CDK17Q00537 523 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 ZBTB16Q05516 673 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 PDCLQ13371 301 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 ZNF234Q14588 700 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 DUOXA1Q1HG43 343 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 ACBD5Q5T8D3 534 aaPredicted RBP15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 KIAA1211LQ6NV74 962 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 SERPINA13PQ6UXR4 307 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 TMPRSS6Q8IU80 811 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 TMEFF1Q8IYR6 380 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 FAM71AQ8IYT1 594 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 C1orf131Q8NDD1 294 aaKnown RBP15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 CADM4Q8NFZ8 388 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 PRCCQ92733 491 aaPredicted RBP15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 P2RY11Q96G91 374 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 FCRL2Q96LA5 508 aaPredicted RBP15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 LSM14BQ9BX40 385 aaKnown RBP15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 GGA2Q9UJY4 613 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 PILRBQ9UKJ0 227 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 NAALADL1Q9UQQ1 740 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 SDK1Q7Z5N4 2213 aa15.09■□□□□ 0.01
NIF3L1-205ENST00000409588 IGHV1OR15-9A0A0B4J2B8 117 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 KCNJ18B7U540 433 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 FOXN3O00409 490 aaPredicted RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 TBL1XO60907 577 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 HSF2BPO75031 334 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 TRUB2O95900 331 aaKnown RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 IGLV3-19P01714 112 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 ASLP04424 464 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 ACADMP11310 421 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 PABPC1P11940 636 aaKnown RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 POLR2EP19388 210 aaKnown RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 CD6P30203 668 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 CLCN1P35523 988 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 IL12RB1P42701 662 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 OXCT1P55809 520 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 ZNF33AQ06730 810 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 SFSWAPQ12872 951 aaKnown RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 EIF4EBP2Q13542 120 aaPredicted RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 CAMK2GQ13555 558 aaPredicted RBP15.08■□□□□ 0
NIF3L1-205ENST00000409588 SLC12A1Q13621 1099 aa15.08■□□□□ 0
NIF3L1-205ENST00000409588 KCNJ12Q14500 433 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms