RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CDH22Q9UJ99 828 aa17.43■□□□□ 0.38
SSB-202ENST00000409333 HS3ST4Q9Y661 456 aa17.43■□□□□ 0.38
SSB-202ENST00000409333 MTCH2Q9Y6C9 303 aa17.43■□□□□ 0.38
SSB-202ENST00000409333 MYOFQ9NZM1 2061 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 STC2O76061 302 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 CKMP06732 381 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 COG7P83436 770 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 GPR158Q5T848 1215 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 NUGGCQ68CJ6 796 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 ANKRD54Q6NXT1 300 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 VSIG1Q86XK7 387 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 PQLC3Q8N755 202 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 PCDH19Q8TAB3 1148 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 PLD4Q96BZ4 506 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 RNF157Q96PX1 679 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 OSBPL2Q9H1P3 480 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 CPQQ9Y646 472 aa17.42■□□□□ 0.38
SSB-202ENST00000409333 TRAV19A0A0A6YYK7 116 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 EEF2KO00418 725 aaKnown RBP17.41■□□□□ 0.38
SSB-202ENST00000409333 CST8O60676 142 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 CEBPBP17676 345 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 ARL4AP40617 200 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 ADAM15Q13444 863 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 CLUL1Q15846 466 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 ATP6V0D2Q8N8Y2 350 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 ADAMTS19Q8TE59 1207 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 ING5Q8WYH8 240 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 BTN2A3PQ96KV6 586 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 EFR3BQ9Y2G0 817 aa17.41■□□□□ 0.38
SSB-202ENST00000409333 R3HDM2Q9Y2K5 976 aaKnown RBP17.41■□□□□ 0.38
SSB-202ENST00000409333 NYNRINQ9P2P1 1898 aaKnown RBP17.41■□□□□ 0.38
SSB-202ENST00000409333 ZNF487B1APH4 448 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 H3BRJ5 948 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 LRIG2O94898 1065 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 TJP3O95049 919 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 AMPD1P23109 780 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 SLC7A9P82251 487 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 MS4A13Q5J8X5 152 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 PRPF38BQ5VTL8 546 aaKnown RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 NADSYN1Q6IA69 706 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 SYCE2Q6PIF2 218 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 POTEHQ6S545 545 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 BBS12Q6ZW61 710 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 UNC45BQ8IWX7 931 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 PRELID2Q8N945 189 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 NOA1Q8NC60 698 aaKnown RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 ITFG1Q8TB96 612 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 HAUS1Q96CS2 278 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 EPAS1Q99814 870 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 FAM118BQ9BPY3 351 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 MAK16Q9BXY0 300 aaKnown RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 SMG9Q9H0W8 520 aaKnown RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 ARHGEF4Q9NR80 690 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 RCOR3Q9P2K3 495 aaPredicted RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 NEU3Q9UQ49 428 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 MFHAS1Q9Y4C4 1052 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 CHD5Q8TDI0 1954 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 TBX10O75333 385 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 KLKB1P03952 638 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 SRGAP2BP0DMP2 458 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 IGFBP4P22692 258 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 DDX6P26196 483 aaKnown RBP eCLIP17.4■□□□□ 0.382e-14■■■□□ 14.8
SSB-202ENST00000409333 CORO1AP31146 461 aaKnown RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 TPI1P60174 286 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 ITIH3Q06033 890 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 DLX2Q07687 328 aaPredicted RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 DPYSQ14117 519 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 ARHGAP15Q53QZ3 475 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 ARTNQ5T4W7 220 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 RFX8Q6ZV50 586 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 C14orf80Q86SX3 495 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 DENND1CQ8IV53 801 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 C1orf54Q8WWF1 131 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 ATG4AQ8WYN0 398 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 TASP1Q9H6P5 420 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 ETNK2Q9NVF9 386 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 CLEC1BQ9P126 229 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 SAE1Q9UBE0 346 aaPredicted RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 SLC12A6Q9UHW9 1150 aa17.4■□□□□ 0.38
SSB-202ENST00000409333 MRPS23Q9Y3D9 190 aaKnown RBP17.4■□□□□ 0.38
SSB-202ENST00000409333 GOLGA6L7A0A1B0GV03 622 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 ZNF197O14709 1029 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 SCAMP3O14828 347 aaKnown RBP17.39■□□□□ 0.37
SSB-202ENST00000409333 PFKLP17858 780 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 HARS2P49590 506 aaKnown RBP17.39■□□□□ 0.37
SSB-202ENST00000409333 MLLT6P55198 1093 aaPredicted RBP17.39■□□□□ 0.37
SSB-202ENST00000409333 TFDP2Q14188 446 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 MANEALQ5VSG8 457 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 RAP1GAP2Q684P5 730 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 SLC9A4Q6AI14 798 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 GPR149Q86SP6 731 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 KLHL7Q8IXQ5 586 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 CMTM8Q8IZV2 173 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 PLD5Q8N7P1 536 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 TTC16Q8NEE8 873 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 MAIP1Q8WWC4 291 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 RPGRIP1Q96KN7 1286 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 ZSWIM3Q96MP5 696 aa17.39■□□□□ 0.37
SSB-202ENST00000409333 DDX47Q9H0S4 455 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms