RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 IKBKEQ14164 716 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 NOMO1Q15155 1222 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 TAF11Q15544 211 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CYP1B1Q16678 543 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 TTLL9Q3SXZ7 439 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 PABPC1LQ4VXU2 614 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 HSP90AA5PQ58FG0 334 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 LDLRAD1Q5T700 205 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 PDPK2PQ6A1A2 396 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 AADACL2Q6P093 401 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 VSTM1Q6UX27 236 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 B3GNT9Q6UX72 402 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 EP400NLQ6ZTU2 488 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 NIPA2Q8N8Q9 360 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 HASPINQ8TF76 798 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ERP27Q96DN0 273 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 APOPT1Q96IL0 206 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 NSL1Q96IY1 281 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM111AQ96PZ2 611 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CPNE1Q99829 537 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 MRPL45Q9BRJ2 306 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 FICDQ9BVA6 458 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ILKAPQ9H0C8 392 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 TKTL2Q9H0I9 626 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SYTL2Q9HCH5 934 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 PCDH18Q9HCL0 1135 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 KLC4Q9NSK0 619 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ANKRD6Q9Y2G4 727 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ACOT9Q9Y305 439 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 MYH13Q9UKX3 1938 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 C4AP0C0L4 1744 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 AKAP11Q9UKA4 1901 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 HEATR9A2RTY3 570 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 MOXD2PA6NHM9 499 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 NEMP1O14524 444 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 MDM4O15151 490 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 GSTA4O15217 222 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 TREHO43280 583 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SOAT2O75908 522 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 TMCC1O94876 653 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 GNRH1P01148 92 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CALCAP01258 141 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SERPINF2P08697 491 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 KRT16P08779 473 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 HIST1H2AGP0C0S8 130 aaPredicted RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 HIST1H2ADP20671 130 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ARHGEF7Q14155 803 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 IMPG1Q17R60 797 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CCDC153Q494R4 210 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC39A12Q504Y0 691 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 C1orf146Q5VVC0 180 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 RETSATQ6NUM9 610 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 STRA8Q7Z7C7 330 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 YAF2Q8IY57 180 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 JOSD2Q8TAC2 188 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SPPL2BQ8TCT7 592 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ACMSDQ8TDX5 336 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 MYLPFQ96A32 169 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 PPWD1Q96BP3 646 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 HIST1H2AHQ96KK5 128 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 CPXM1Q96SM3 734 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 YME1L1Q96TA2 773 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 HIST1H2AJQ99878 128 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 H2AFJQ9BTM1 129 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 DDX23Q9BUQ8 820 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ADGRE3Q9BY15 652 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 SARS2Q9NP81 518 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 THEGQ9P2T0 379 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 ADAM28Q9UKQ2 775 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 L3MBTL1Q9Y468 752 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 TRIM17Q9Y577 477 aa4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 MYH14Q7Z406 1995 aaKnown RBP4.87□□□□□ -1.63
PCDH11X-207ENST00000406881 EFCAB14O75071 495 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 MYO1DO94832 1006 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 MAP3K6O95382 1288 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 TYMPP19971 482 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 CRABP2P29373 138 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 CCDC15Q0P6D6 951 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 TSTA3Q13630 321 aaPredicted RBP4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 AUHQ13825 339 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 HIC1Q14526 733 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 KBTBD12Q3ZCT8 623 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 ATP13A4Q4VNC1 1196 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 PPP1R15BQ5SWA1 713 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 PTRHD1Q6GMV3 140 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM117BQ6P1L5 589 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 C16orf89Q6UX73 402 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 KYAT3Q6YP21 454 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC24A5Q71RS6 500 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 KDELC2Q7Z4H8 507 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 PALB2Q86YC2 1186 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 SUGP1Q8IWZ8 645 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 NUP93Q8N1F7 819 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 SLAIN1Q8ND83 568 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 ZNF516Q92618 1163 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 FAM161BQ96MY7 647 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 SRPK1Q96SB4 655 aaKnown RBP4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 SLC9A7Q96T83 725 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 EMILIN2Q9BXX0 1053 aa4.86□□□□□ -1.63
PCDH11X-207ENST00000406881 IL22Q9GZX6 179 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms