RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 BMP1P13497 986 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 AIF1P55008 147 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 SCAPQ12770 1279 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 ATP13A4Q4VNC1 1196 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 BOLA3Q53S33 107 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 FAM133BQ5BKY9 247 aaKnown RBP34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 MS4A13Q5J8X5 152 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 EFHC2Q5JST6 749 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 ADGRF1Q5T601 910 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 YAF2Q8IY57 180 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 DEPDC1BQ8WUY9 529 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 OSCP1Q8WVF1 389 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 ASIC4Q96FT7 647 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 DUS2Q9NX74 493 aaKnown RBP34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 TBC1D14Q9P2M4 693 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 STOML2Q9UJZ1 356 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 AP4E1Q9UPM8 1137 aa34.47■■■■□ 3.11
CSNK1E-204ENST00000403904 ASGR2P07307 311 aa34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 RARAP10276 462 aa34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 RAP1GAP2Q684P5 730 aa34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 TRIM68Q6AZZ1 485 aa34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 PEX26Q7Z412 305 aa34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 NT5DC3Q86UY8 548 aa34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 PYROXD2Q8N2H3 581 aa34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 TRIM58Q8NG06 486 aa34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 HSPH1Q92598 858 aa34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 KIF26AQ9ULI4 1882 aaPredicted RBP34.46■■■■□ 3.11
CSNK1E-204ENST00000403904 SLC6A4P31645 630 aa34.45■■■■□ 3.11
CSNK1E-204ENST00000403904 MTA1Q13330 715 aa34.45■■■■□ 3.11
CSNK1E-204ENST00000403904 CA9Q16790 459 aa34.45■■■■□ 3.11
CSNK1E-204ENST00000403904 RFWD3Q6PCD5 774 aa34.45■■■■□ 3.11
CSNK1E-204ENST00000403904 KIAA1958Q8N8K9 716 aa34.45■■■■□ 3.11
CSNK1E-204ENST00000403904 AMFRQ9UKV5 643 aa34.45■■■■□ 3.11
CSNK1E-204ENST00000403904 TRDMT1O14717 391 aaKnown RBP34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 SLC9A3R1O14745 358 aaPredicted RBP34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 IFNAR2P48551 515 aa34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 VCPP55072 806 aaKnown RBP34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 MLLT6P55198 1093 aaPredicted RBP34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 CHSY1Q86X52 802 aa34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 RHOT1Q8IXI2 618 aa34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 CD101Q93033 1021 aa34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 NXPE3Q969Y0 559 aa34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 PRMT1Q99873 361 aaKnown RBP34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 TRMT61BQ9BVS5 477 aaKnown RBP34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 DHX35Q9H5Z1 703 aaKnown RBP34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 IGSF9Q9P2J2 1179 aa34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 PACSIN2Q9UNF0 486 aaPredicted RBP34.45■■■■□ 3.1
CSNK1E-204ENST00000403904 VCANP13611 3396 aa34.44■■■■□ 3.1
CSNK1E-204ENST00000403904 KRT7P08729 469 aa34.44■■■■□ 3.1
CSNK1E-204ENST00000403904 GDI1P31150 447 aa34.44■■■■□ 3.1
CSNK1E-204ENST00000403904 TEKT4Q8WW24 435 aa34.44■■■■□ 3.1
CSNK1E-204ENST00000403904 C1orf74Q96LT6 269 aa34.44■■■■□ 3.1
CSNK1E-204ENST00000403904 FAM83CQ9BQN1 747 aa34.44■■■■□ 3.1
CSNK1E-204ENST00000403904 OSBPL2Q9H1P3 480 aa34.44■■■■□ 3.1
CSNK1E-204ENST00000403904 STAU2Q9NUL3 570 aaKnown RBP eCLIP34.44■■■■□ 3.1
CSNK1E-204ENST00000403904 OR12D3Q9UGF7 316 aa34.44■■■■□ 3.1
CSNK1E-204ENST00000403904 MYOFQ9NZM1 2061 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 FAM72CH0Y354 149 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 KIF5CO60282 957 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 TACR2P21452 398 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 AUHQ13825 339 aaKnown RBP34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 EML3Q32P44 896 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 ZNF569Q5MCW4 686 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 FAM72AQ5TYM5 149 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 FAM72DQ6L9T8 149 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 POLNQ7Z5Q5 900 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 C14orf80Q86SX3 495 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 FAM72BQ86X60 149 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 FAM217AQ8IXS0 508 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 ADGRG2Q8IZP9 1017 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 SLC44A3Q8N4M1 653 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 KRT35Q92764 455 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 OTUB2Q96DC9 234 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 KLHL11Q9NVR0 708 aa34.43■■■■□ 3.1
CSNK1E-204ENST00000403904 TSPAN3O60637 253 aa34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 CHKAP35790 457 aa34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 MARCKSL1P49006 195 aa34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 ZFYVE27Q5T4F4 411 aa34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 LRRC38Q5VT99 294 aa34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 PSTKQ8IV42 348 aaKnown RBP34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 MYEOVQ96EZ4 313 aa34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 DDX50Q9BQ39 737 aaKnown RBP34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 EBF3Q9H4W6 596 aa34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 VANGL2Q9ULK5 521 aa34.42■■■■□ 3.1
CSNK1E-204ENST00000403904 ARSAP15289 507 aa34.41■■■■□ 3.1
CSNK1E-204ENST00000403904 CPXM2Q8N436 756 aa34.41■■■■□ 3.1
CSNK1E-204ENST00000403904 CHADO15335 359 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 PSTPIP1O43586 416 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 SRGAP2O75044 1071 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 TNK2Q07912 1038 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 PPP6R3Q5H9R7 873 aaPredicted RBP34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 FBXL22Q6P050 247 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 TPGS1Q6ZTW0 290 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 LGI2Q8N0V4 545 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 KCTD15Q96SI1 283 aaPredicted RBP34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 F5H5T6 163 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 L1CAMP32004 1257 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 CTNNA1P35221 906 aaKnown RBP34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 PDGFRLQ15198 375 aa34.4■■■■□ 3.1
CSNK1E-204ENST00000403904 TMEM25Q86YD3 366 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms