RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 TMX2-CTNND1H3BSU7 103 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 USP2O75604 605 aaPredicted RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 THRAP10827 490 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 IL1R2P27930 398 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 CRADDP78560 199 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 XIAPP98170 497 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 ORC1Q13415 861 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 CUL2Q13617 745 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 MAP7D1Q3KQU3 841 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 NIPA1Q7RTP0 329 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 GPD1LQ8N335 351 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 PKP2Q99959 881 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 CEPT1Q9Y6K0 416 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 RBBP6Q7Z6E9 1792 aaKnown RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 KLF11O14901 512 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 IDH3AP50213 366 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 ROR1Q01973 937 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 CCDC92Q53HC0 331 aaPredicted RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 OGFRL1Q5TC84 451 aaPredicted RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 FAM91A1Q658Y4 838 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 DRICH1Q6PGQ1 229 aaPredicted RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 POTEHQ6S545 545 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 MYO1HQ8N1T3 1032 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 DDI1Q8WTU0 396 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 THAP11Q96EK4 314 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 PPP1R16BQ96T49 567 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 RBM38Q9H0Z9 239 aaKnown RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 EPB41L1Q9H4G0 881 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 RBMX2Q9Y388 322 aaKnown RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 COL6A2P12110 1019 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 C16orf87Q6PH81 154 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 SH2D5Q6ZV89 423 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 KBTBD6Q86V97 674 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 SNX32Q86XE0 403 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 C10orf107Q8IVU9 208 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 TMEM130Q8N3G9 435 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 LENG8Q96PV6 779 aaPredicted RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 NUF2Q9BZD4 464 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 APOBEC3GQ9HC16 384 aaKnown RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 CYP26B1Q9NR63 512 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 MAGED2Q9UNF1 606 aaPredicted RBP17.55■□□□□ 0.4
PTPRA-205ENST00000399903 COQ4Q9Y3A0 265 aa17.55■□□□□ 0.4
PTPRA-205ENST00000399903 AMHP03971 560 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 OSBPP22059 807 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 LIG4P49917 911 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 THOP1P52888 689 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 CCDC142Q17RM4 750 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 TDRD10Q5VZ19 366 aaKnown RBP17.54■□□□□ 0.4
PTPRA-205ENST00000399903 GPAT2Q6NUI2 795 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 OXCT2Q9BYC2 517 aaPredicted RBP17.54■□□□□ 0.4
PTPRA-205ENST00000399903 TRPV6Q9H1D0 765 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 NRDE2Q9H7Z3 1164 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 ARHGEF37A1IGU5 675 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 ETFBP38117 255 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 ENOSF1Q7L5Y1 443 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 TAS1R3Q7RTX0 852 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 ZNF677Q86XU0 584 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 HACE1Q8IYU2 909 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 JOSD2Q8TAC2 188 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 ZNF358Q9NW07 568 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 FETUBQ9UGM5 382 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 AFG3L2Q9Y4W6 797 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 PSAPP07602 524 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 P4HA1P13674 534 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 SFNP31947 248 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 LY6KQ17RY6 165 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 OGFOD2Q6N063 350 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 SCYL2Q6P3W7 929 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 APOBEC3FQ8IUX4 373 aaKnown RBP17.54■□□□□ 0.4
PTPRA-205ENST00000399903 TNS4Q8IZW8 715 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 ATP6V0A1Q93050 837 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 PPWD1Q96BP3 646 aaKnown RBP17.54■□□□□ 0.4
PTPRA-205ENST00000399903 TMEM79Q9BSE2 394 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 ZNF112Q9UJU3 913 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 SSX2IPQ9Y2D8 614 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 TSC22D4Q9Y3Q8 395 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 TTLL3Q9Y4R7 772 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 TEX264Q9Y6I9 313 aa17.54■□□□□ 0.4
PTPRA-205ENST00000399903 TMEM221A6NGB7 291 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 ZFXP17010 805 aaPredicted RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 PPP2R5DQ14738 602 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 HADHQ16836 314 aaKnown RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 PPM1JQ5JR12 505 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 ADGRF2Q8IZF7 708 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 WDR55Q9H6Y2 383 aaPredicted RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 FAIMQ9NVQ4 179 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 DDX56Q9NY93 547 aaKnown RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 ITGA11Q9UKX5 1188 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 PPME1Q9Y570 386 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 DENRO43583 198 aaKnown RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 STBD1O95210 358 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 HSPA4LO95757 839 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 GJB1P08034 283 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 PTPN1P18031 435 aaKnown RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 TMED10P49755 219 aaKnown RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 NLRP11P59045 1033 aaKnown RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 YWHAZP63104 245 aaKnown RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 C1QBPQ07021 282 aaKnown RBP17.53■□□□□ 0.4
PTPRA-205ENST00000399903 TEDDM1Q5T9Z0 273 aa17.53■□□□□ 0.4
PTPRA-205ENST00000399903 PGM2L1Q6PCE3 622 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms