RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 CXCR3P49682 368 aa30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 FAM133BQ5BKY9 247 aaKnown RBP30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 BRMS1LQ5PSV4 323 aa30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 PPP1R15BQ5SWA1 713 aa30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 SH3PXD2AQ5TCZ1 1133 aa30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 FAM131BQ86XD5 332 aa30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 TMEM105Q8N8V8 129 aa30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 FAM172AQ8WUF8 416 aa30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 FBRSL1Q9HCM7 1045 aaKnown RBP30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 ARHGEF4Q9NR80 690 aa30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 TMEM51Q9NW97 253 aa30.47■■■□□ 2.47
CHCHD4-202ENST00000396914 TYW5A2RUC4 315 aaKnown RBP30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 TULP3O75386 442 aa30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 AVPR2P30518 371 aa30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 ZNF143P52747 638 aaPredicted RBP30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 TMEM196Q5HYL7 178 aa30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 FYB2Q5VWT5 728 aa30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 FSTL4Q6MZW2 842 aa30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 LGI2Q8N0V4 545 aa30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 SIK2Q9H0K1 926 aa30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 RBM12Q9NTZ6 932 aaKnown RBP30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 STIM2Q9P246 746 aa30.46■■■□□ 2.47
CHCHD4-202ENST00000396914 MIA3Q5JRA6 1907 aa30.45■■■□□ 2.46
CHCHD4-202ENST00000396914 EGFP01133 1207 aa30.45■■■□□ 2.46
CHCHD4-202ENST00000396914 APODP05090 189 aa30.45■■■□□ 2.46
CHCHD4-202ENST00000396914 DRD1P21728 446 aa30.45■■■□□ 2.46
CHCHD4-202ENST00000396914 GALCP54803 685 aa30.45■■■□□ 2.46
CHCHD4-202ENST00000396914 MTA1Q13330 715 aa30.45■■■□□ 2.46
CHCHD4-202ENST00000396914 ASTE1Q2TB18 679 aaPredicted RBP30.45■■■□□ 2.46
CHCHD4-202ENST00000396914 ARHGAP30Q7Z6I6 1101 aaPredicted RBP30.45■■■□□ 2.46
CHCHD4-202ENST00000396914 PANX2Q96RD6 677 aa30.45■■■□□ 2.46
CHCHD4-202ENST00000396914 F5H5T6 163 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 CCP110O43303 1012 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 CACNG3O60359 315 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 TBL1XO60907 577 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 TACR2P21452 398 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 PSMA2P25787 234 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 EIF2DP41214 584 aaKnown RBP30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 PREPLQ4J6C6 727 aaPredicted RBP30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 DGKKQ5KSL6 1271 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 PIK3R6Q5UE93 754 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 GRAMD4Q6IC98 578 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 STRADAQ7RTN6 431 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 CNPY3Q9BT09 278 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 GRPEL1Q9HAV7 217 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 IMPACTQ9P2X3 320 aa30.44■■■□□ 2.46
CHCHD4-202ENST00000396914 PAGE1O75459 146 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 PENKP01210 267 aaPredicted RBP30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 CHRNB1P11230 501 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 DGKGP49619 791 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 SGSHP51688 502 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 RAB6CQ53S08 254 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 MS4A13Q5J8X5 152 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 SCYL2Q6P3W7 929 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 ETFBKMTQ8IXQ9 262 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 HJURPQ8NCD3 748 aaPredicted RBP30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 CTNNBL1Q8WYA6 563 aaPredicted RBP30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 RAB6CQ9H0N0 254 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 ARHGEF38Q9NXL2 777 aa30.43■■■□□ 2.46
CHCHD4-202ENST00000396914 F5P12259 2224 aa30.42■■■□□ 2.46
CHCHD4-202ENST00000396914 TBC1D3BA6NDS4 549 aa30.42■■■□□ 2.46
CHCHD4-202ENST00000396914 ENDOD1O94919 500 aa30.42■■■□□ 2.46
CHCHD4-202ENST00000396914 KAT7O95251 611 aa30.42■■■□□ 2.46
CHCHD4-202ENST00000396914 H2AFZP0C0S5 128 aa30.42■■■□□ 2.46
CHCHD4-202ENST00000396914 ARL13BQ3SXY8 428 aa30.42■■■□□ 2.46
CHCHD4-202ENST00000396914 NUDT18Q6ZVK8 323 aa30.42■■■□□ 2.46
CHCHD4-202ENST00000396914 H2AFVQ71UI9 128 aa30.42■■■□□ 2.46
CHCHD4-202ENST00000396914 CFAP52Q8N1V2 620 aa30.42■■■□□ 2.46
CHCHD4-202ENST00000396914 TMEM191CA6NGB0 347 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 TRIM24O15164 1050 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 GGCXP38435 758 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 GRIA2P42262 883 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 SEC13P55735 322 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 OGDHQ02218 1023 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 CCINQ13939 588 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 BNIPLQ7Z465 357 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 CCDC117Q8IWD4 279 aaPredicted RBP30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 ZNF687Q8N1G0 1237 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 P2RY11Q96G91 374 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 PRICKLE1Q96MT3 831 aaPredicted RBP30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 NUP85Q9BW27 656 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 PACSIN1Q9BY11 444 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 TMPRSS4Q9NRS4 437 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 NENFQ9UMX5 172 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 HS3ST4Q9Y661 456 aa30.41■■■□□ 2.46
CHCHD4-202ENST00000396914 HDAC4P56524 1084 aa30.4■■■□□ 2.46
CHCHD4-202ENST00000396914 RPS24P62847 133 aaKnown RBP30.4■■■□□ 2.46
CHCHD4-202ENST00000396914 RABGAP1LQ5R372 815 aa30.4■■■□□ 2.46
CHCHD4-202ENST00000396914 CENPIQ92674 756 aaPredicted RBP30.4■■■□□ 2.46
CHCHD4-202ENST00000396914 CLDN23Q96B33 292 aa30.4■■■□□ 2.46
CHCHD4-202ENST00000396914 ARHGEF26Q96DR7 871 aa30.4■■■□□ 2.46
CHCHD4-202ENST00000396914 RPRD1AQ96P16 312 aaPredicted RBP30.4■■■□□ 2.46
CHCHD4-202ENST00000396914 ANLNQ9NQW6 1124 aa30.4■■■□□ 2.46
CHCHD4-202ENST00000396914 VANGL2Q9ULK5 521 aa30.4■■■□□ 2.46
CHCHD4-202ENST00000396914 CYP1A2P05177 515 aa30.39■■■□□ 2.46
CHCHD4-202ENST00000396914 HOXD9P28356 352 aaPredicted RBP30.39■■■□□ 2.46
CHCHD4-202ENST00000396914 MESP2Q0VG99 397 aa30.39■■■□□ 2.46
CHCHD4-202ENST00000396914 FZD5Q13467 585 aa30.39■■■□□ 2.46
CHCHD4-202ENST00000396914 AUHQ13825 339 aaKnown RBP30.39■■■□□ 2.46
CHCHD4-202ENST00000396914 CARNMT1Q8N4J0 409 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms