RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PHF12Q96QT6 1004 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 SUDS3Q9H7L9 328 aaPredicted RBP24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 NRDE2Q9H7Z3 1164 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 PRKCBP05771 671 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 PDGFRAP16234 1089 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 NCF2P19878 526 aaPredicted RBP24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 PRKCHP24723 683 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 CA9Q16790 459 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 TEDDM1Q5T9Z0 273 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 VWA5B1Q5TIE3 1220 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 CASC4Q6P4E1 433 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 CMASQ8NFW8 434 aaPredicted RBP24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 DIS3LQ8TF46 1054 aaKnown RBP24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 RXFP2Q8WXD0 754 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 IFT122Q9HBG6 1241 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 C6orf203Q9P0P8 240 aaPredicted RBP24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 PSMD13Q9UNM6 376 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 MAFBQ9Y5Q3 323 aaPredicted RBP24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 AP4B1Q9Y6B7 739 aa24.7■■□□□ 1.54
CSNK1E-203ENST00000396832 HMX2A2RU54 273 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 SPATA31C2B4DYI2 1134 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 INO80B-WBP1J3KQ70 363 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 TRMUO75648 421 aaKnown RBP24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 NFICP08651 508 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 CDH5P33151 784 aaPredicted RBP24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 MAGEA10P43363 369 aaPredicted RBP24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 SLC1A6P48664 564 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 HDAC4P56524 1084 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 COG7P83436 770 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 TMEM62Q0P6H9 643 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 EEF1DP3Q658K8 133 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 TSHZ1Q6ZSZ6 1077 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 MAVSQ7Z434 540 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 AHI1Q8N157 1196 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 APBB2Q92870 758 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 PCYT2Q99447 389 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 INO80BQ9C086 356 aaPredicted RBP24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 RSAD1Q9HA92 442 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 MYOZ2Q9NPC6 264 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 RAB26Q9ULW5 256 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 AFG3L2Q9Y4W6 797 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 H3BSA7 217 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 IDH3AP50213 366 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 TAZQ16635 292 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 NBPF12Q5TAG4 269 aaPredicted RBP24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 PDPK2PQ6A1A2 396 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 ZNF554Q86TJ5 538 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 AGR3Q8TD06 166 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 HEXIM2Q96MH2 286 aaKnown RBP24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 MRPL4Q9BYD3 311 aaKnown RBP24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 ELOVL4Q9GZR5 314 aa24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 STN1Q9H668 368 aaKnown RBP24.69■■□□□ 1.54
CSNK1E-203ENST00000396832 TRDMT1O14717 391 aaKnown RBP24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 MAFGO15525 162 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 MTTPP55157 894 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 DEPDC1BQ8WUY9 529 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 ZNF696Q9H7X3 374 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 CHADO15335 359 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 TNNC2P02585 160 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 ITGB3P05106 788 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 PRKG1Q13976 671 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 ZNF667Q5HYK9 610 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 WDR78Q5VTH9 848 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 MBLAC2Q68D91 279 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 ALDH16A1Q8IZ83 802 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 PPP1R14BQ96C90 147 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 MAML3Q96JK9 1138 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 TEPSINQ96N21 525 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 PNPOQ9NVS9 261 aa24.68■■□□□ 1.54
CSNK1E-203ENST00000396832 SLC15A5A6NIM6 579 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 OGTO15294 1046 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 PRPSAP2O60256 369 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 GSRP00390 522 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 PPIDQ08752 370 aaKnown RBP24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 CYP4V2Q6ZWL3 525 aaPredicted RBP24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 ZNF410Q86VK4 478 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 PLD5Q8N7P1 536 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 C12orf29Q8N999 325 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 SLC4A11Q8NBS3 891 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 ACO2Q99798 780 aaKnown RBP24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 CEP41Q9BYV8 373 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 ACSS2Q9NR19 701 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 METTL18O95568 372 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 BCAR1P56945 870 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 CXCL9Q07325 125 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 SH3D19Q5HYK7 790 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 PHTF2Q8N3S3 785 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 ATXN7L3BQ96GX2 97 aa24.67■■□□□ 1.54
CSNK1E-203ENST00000396832 APOEP02649 317 aa24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 UBA1P22314 1058 aaKnown RBP24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 ATXN1P54253 815 aaKnown RBP24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 PTPN11Q06124 597 aaPredicted RBP24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 SAMD7Q7Z3H4 446 aa24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 HSPBAP1Q96EW2 488 aa24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 ANKRD36BP1Q96IX9 119 aa24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 LRGUKQ96M69 825 aa24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 KCNK16Q96T55 309 aa24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 CPSF3Q9UKF6 684 aaKnown RBP24.66■■□□□ 1.54
CSNK1E-203ENST00000396832 FBXO21O94952 628 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms