RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 IQANK1A0A1B0GTG1 560 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 INHAP05111 366 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 INHBAP08476 426 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 CA4P22748 312 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 HCAR3P49019 387 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 SARNPP82979 210 aaKnown RBP15.42■□□□□ 0.06
CBX3-202ENST00000396386 CDK16Q00536 496 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 YWHAHQ04917 246 aaPredicted RBP15.42■□□□□ 0.06
CBX3-202ENST00000396386 SPARCL1Q14515 664 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 MBTPS1Q14703 1052 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 KBTBD12Q3ZCT8 623 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 NOMO2Q5JPE7 1267 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 CLLU1OSQ5K130 101 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 BSPRYQ5W0U4 402 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 CCDC121Q6ZUS5 278 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 TAC4Q86UU9 113 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 SPATA2LQ8IUW3 424 aaPredicted RBP15.42■□□□□ 0.06
CBX3-202ENST00000396386 MZB1Q8WU39 189 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 SLC44A1Q8WWI5 657 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 P2RY11Q96G91 374 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 COLEC11Q9BWP8 271 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 ANLNQ9NQW6 1124 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 STARD7Q9NQZ5 370 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 EIF2B3Q9NR50 452 aaKnown RBP15.42■□□□□ 0.06
CBX3-202ENST00000396386 FGFR1OP2Q9NVK5 253 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 A0A1W2PPM1 405 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 F8W810 466 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 FAM72CH0Y354 149 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 TMEM189-UBE2V1I3L0A0 370 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 TRPA1O75762 1119 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 HSPA1AP0DMV8 641 aaKnown RBP15.42■□□□□ 0.06
CBX3-202ENST00000396386 HSPA1BP0DMV9 641 aaKnown RBP15.42■□□□□ 0.06
CBX3-202ENST00000396386 ERCC2P18074 760 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 CXCR3P49682 368 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 WDR4P57081 412 aaKnown RBP15.42■□□□□ 0.06
CBX3-202ENST00000396386 DSC1Q08554 894 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 FAM72AQ5TYM5 149 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 NUGGCQ68CJ6 796 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 FAM72DQ6L9T8 149 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 BEND5Q7L4P6 421 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 LRRTM3Q86VH5 581 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 FAM72BQ86X60 149 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 SLC43A3Q8NBI5 491 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 CCNYQ8ND76 341 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 DENND1AQ8TEH3 1009 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 EPAS1Q99814 870 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 ELAC2Q9BQ52 826 aaKnown RBP15.42■□□□□ 0.06
CBX3-202ENST00000396386 PRDM12Q9H4Q4 367 aa15.42■□□□□ 0.06
CBX3-202ENST00000396386 I6L893 689 aaPredicted RBP15.41■□□□□ 0.06
CBX3-202ENST00000396386 TYROBPO43914 113 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 B4GALT3O60512 393 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 ZWINTO95229 277 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 ASMTLO95671 621 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 OAS1P00973 400 aaKnown RBP15.41■□□□□ 0.06
CBX3-202ENST00000396386 GNRH1P01148 92 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 MAGEA9P43362 315 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 RTN4RL1Q86UN2 441 aaPredicted RBP15.41■□□□□ 0.06
CBX3-202ENST00000396386 C10orf67Q8IYJ2 551 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 COLGALT1Q8NBJ5 622 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 DQX1Q8TE96 717 aaKnown RBP15.41■□□□□ 0.06
CBX3-202ENST00000396386 ALKBH8Q96BT7 664 aaKnown RBP15.41■□□□□ 0.06
CBX3-202ENST00000396386 PAIP2Q9BPZ3 127 aaKnown RBP15.41■□□□□ 0.06
CBX3-202ENST00000396386 WDCPQ9H6R7 721 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 SEPT10Q9P0V9 454 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 NR2E3Q9Y5X4 410 aa15.41■□□□□ 0.06
CBX3-202ENST00000396386 TRDMT1O14717 391 aaKnown RBP15.4■□□□□ 0.06
CBX3-202ENST00000396386 TRIM66O15016 1216 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 NCAM2O15394 837 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 PIAS1O75925 651 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 DDHD2O94830 711 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 MLNP12872 115 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 KRT4P19013 534 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 RPA3P35244 121 aaPredicted RBP15.4■□□□□ 0.06
CBX3-202ENST00000396386 ZKSCAN8Q15776 578 aaPredicted RBP15.4■□□□□ 0.06
CBX3-202ENST00000396386 NETO2Q8NC67 525 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 SLAIN1Q8ND83 568 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 EBNA1BP2Q99848 306 aaKnown RBP15.4■□□□□ 0.06
CBX3-202ENST00000396386 FTHL17Q9BXU8 183 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 TKTL2Q9H0I9 626 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 HMX1Q9NP08 348 aaPredicted RBP15.4■□□□□ 0.06
CBX3-202ENST00000396386 SNX3O60493 162 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 APOEP02649 317 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 AMHP03971 560 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 PRKCHP24723 683 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 SERPINB6P35237 376 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 SLC5A3P53794 718 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 FAM189BP81408 668 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 WASHC5Q12768 1159 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 LHX8Q68G74 356 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 UNC5AQ6ZN44 842 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 LRRC8DQ7L1W4 858 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 SLC26A11Q86WA9 606 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 ZNF280BQ86YH2 543 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 COLGALT2Q8IYK4 626 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 GSDMBQ8TAX9 411 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 RNF34Q969K3 372 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 SIGLEC10Q96LC7 697 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 BRD8Q9H0E9 1235 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 TBC1D13Q9NVG8 400 aa15.4■□□□□ 0.06
CBX3-202ENST00000396386 KANSL3Q9P2N6 904 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms