RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 GPRIN1Q7Z2K8 1008 aa14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 ADIPOR2Q86V24 386 aa14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 SMARCD1Q96GM5 515 aa14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 RSPH9Q9H1X1 276 aaPredicted RBP14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 PABPC3Q9H361 631 aaKnown RBP14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 ZHX3Q9H4I2 956 aa14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 FBXO44Q9H4M3 255 aa14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 SCML2Q9UQR0 700 aa14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 ZNF510Q9Y2H8 683 aa14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 KIF26BQ2KJY2 2108 aa14.35□□□□□ -0.11
VCPKMT-201ENST00000395859 LY6G6EA0A0G2JKS1 128 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 VWA3AA6NCI4 1184 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 A8MXQ7 604 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 HHLA1C9JL84 531 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 CYP26A1O43174 497 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 STAU1O95793 577 aaKnown RBP14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 ITGB2P05107 769 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 CKMT1AP12532 417 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 HLA-FP30511 346 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 DDIT3P35638 169 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 CCR10P46092 362 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 ANAPC15P60006 121 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 TRAPPC11Q7Z392 1133 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 CLEC14AQ86T13 490 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 CPXM2Q8N436 756 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 CYB5D2Q8WUJ1 264 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 GOLGA1Q92805 767 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 XYLT2Q9H1B5 865 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 AASDHPPTQ9NRN7 309 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 NUDT5Q9UKK9 219 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 SCML1Q9UN30 329 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 PCDHGA8Q9Y5G5 932 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 U3KQA8 63 aa14.34□□□□□ -0.11
VCPKMT-201ENST00000395859 CRYBG3Q68DQ2 2970 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 A0A1B0GVM2 712 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 LATO43561 262 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 AP1G2O75843 785 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 TNNC2P02585 160 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 GP1BAP07359 652 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 CASP5P51878 434 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 ISXQ2M1V0 245 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 ARL6IP4Q66PJ3 421 aaKnown RBP14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 ZNF776Q68DI1 518 aaPredicted RBP14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 WDR49Q8IV35 697 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 CCDC83Q8IWF9 413 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 GPD1LQ8N335 351 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 KRI1Q8N9T8 703 aaKnown RBP14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 MFSD2AQ8NA29 543 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 OR2T34Q8NGX1 318 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 OR4C6Q8NH72 309 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 CCDC97Q96F63 343 aaPredicted RBP14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 MYO19Q96H55 970 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 AK8Q96MA6 479 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 ACCSQ96QU6 501 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 KRT82Q9NSB4 513 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 AGO1Q9UL18 857 aaKnown RBP14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 EXOC7Q9UPT5 735 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 SATB2Q9UPW6 733 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 C2CD3Q4AC94 2353 aa14.33□□□□□ -0.12
VCPKMT-201ENST00000395859 A0A1W2PQH9 124 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 ENO4A6NNW6 628 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 KRT38O76015 456 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 KRT18P05783 430 aaKnown RBP14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 RARGP13631 454 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 HOXD9P28356 352 aaPredicted RBP14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 WDR72Q3MJ13 1102 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 FNDC3BQ53EP0 1204 aaKnown RBP14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 SCD5Q86SK9 330 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 CBWD2Q8IUF1 395 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 CCNL2Q96S94 520 aaPredicted RBP14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 LLPHQ9BRT6 129 aaKnown RBP14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 BACH2Q9BYV9 841 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 GZF1Q9H116 711 aaPredicted RBP14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 NEUROG2Q9H2A3 272 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 PCIF1Q9H4Z3 704 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 FBXL12Q9NXK8 326 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 ARHGAP20Q9P2F6 1191 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 ATXN7L1Q9ULK2 861 aaPredicted RBP14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 FZD4Q9ULV1 537 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 ATP8B3O60423 1300 aa14.32□□□□□ -0.12
VCPKMT-201ENST00000395859 DOCK9Q9BZ29 2069 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 PMS2P1A4D2B8 440 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 FAM47DPA6NHR8 397 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 SDC3O75056 442 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 GNL2Q13823 731 aaKnown RBP14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 SURF1Q15526 300 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 IQCHQ86VS3 1027 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 WFIKKN2Q8TEU8 576 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 LARP4BQ92615 738 aaKnown RBP14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 EXTL1Q92935 676 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 FAM131CQ96AQ9 280 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 DNAJC19Q96DA6 116 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 SERAC1Q96JX3 654 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 FGFBP2Q9BYJ0 223 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 MTG2Q9H4K7 406 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 SEL1LQ9UBV2 794 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 SEPT3Q9UH03 358 aa14.31□□□□□ -0.12
VCPKMT-201ENST00000395859 PLA2G4CQ9UP65 541 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms