RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 MYO19Q96H55 970 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 ITM2CQ9NQX7 267 aa16.83■□□□□ 0.28
CXCL12-206ENST00000395795 WSB2Q9NYS7 404 aaPredicted RBP16.83■□□□□ 0.28
CXCL12-206ENST00000395795 INTS6Q9UL03 887 aaKnown RBP16.83■□□□□ 0.28
CXCL12-206ENST00000395795 GTPBP10A4D1E9 387 aaKnown RBP16.82■□□□□ 0.28
CXCL12-206ENST00000395795 E5RJQ4 531 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 AP5Z1O43299 807 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 LETM1O95202 739 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-206ENST00000395795 HLA-EP13747 358 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 CD70P32970 193 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 HOXD12P35452 270 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 TBX4P57082 545 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 ZNF445P59923 1031 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 NNTQ13423 1086 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 CAMK2GQ13555 558 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-206ENST00000395795 MPP7Q5T2T1 576 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 CLEC17AQ6ZS10 378 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 ENOSF1Q7L5Y1 443 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 MLKLQ8NB16 471 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 ADAM32Q8TC27 787 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 CYB5D2Q8WUJ1 264 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 IRX2Q9BZI1 471 aaPredicted RBP16.82■□□□□ 0.28
CXCL12-206ENST00000395795 NUCKS1Q9H1E3 243 aaKnown RBP16.82■□□□□ 0.28
CXCL12-206ENST00000395795 TMEM9BQ9NQ34 198 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 ABCB8Q9NUT2 735 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 APEX2Q9UBZ4 518 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 WASF3Q9UPY6 502 aa16.82■□□□□ 0.28
CXCL12-206ENST00000395795 TIMM44O43615 452 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 FGFR1OPO95684 399 aaKnown RBP16.81■□□□□ 0.28
CXCL12-206ENST00000395795 PABPC1P11940 636 aaKnown RBP16.81■□□□□ 0.28
CXCL12-206ENST00000395795 ENGP17813 658 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 GNA15P30679 374 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 RPS24P62847 133 aaKnown RBP16.81■□□□□ 0.28
CXCL12-206ENST00000395795 PDCLQ13371 301 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 NUGGCQ68CJ6 796 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 KIAA1324Q6UXG2 1013 aaKnown RBP16.81■□□□□ 0.28
CXCL12-206ENST00000395795 CHST9Q7L1S5 443 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 TMPRSS6Q8IU80 811 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 ZNF366Q8N895 744 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 HSPA12BQ96MM6 686 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 CPXM1Q96SM3 734 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 CIPCQ9C0C6 399 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 PRDM16Q9HAZ2 1276 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 GGA2Q9UJY4 613 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 TLR6Q9Y2C9 796 aa16.81■□□□□ 0.28
CXCL12-206ENST00000395795 CACNA1EQ15878 2313 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 IRAK2O43187 625 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 THAP12O43422 761 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 TBL1XO60907 577 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 SERPINF2P08697 491 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 PNMA6AP0CW24 399 aaPredicted RBP16.8■□□□□ 0.28
CXCL12-206ENST00000395795 CD6P30203 668 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 CLCN1P35523 988 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 ACADSBP45954 432 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 TPMTP51580 245 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 KCNMA1Q12791 1236 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 NUMA1Q14980 2115 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 ARHGAP44Q17R89 818 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 EXOC3L4Q17RC7 722 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 FSCBQ5H9T9 825 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 MS4A13Q5J8X5 152 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 MBLAC2Q68D91 279 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 GBP6Q6ZN66 633 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 PIP4P1Q86T03 277 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 UNC45BQ8IWX7 931 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 C1orf216Q8TAB5 229 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 WFIKKN2Q8TEU8 576 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 UCMAQ8WVF2 138 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 DNASE2BQ8WZ79 361 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 TOE1Q96GM8 510 aaKnown RBP16.8■□□□□ 0.28
CXCL12-206ENST00000395795 ADAM33Q9BZ11 813 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 ST7Q9NRC1 585 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 PCDHGC3Q9UN70 934 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 ADAMTS9Q9P2N4 1935 aa16.8■□□□□ 0.28
CXCL12-206ENST00000395795 FOXN3O00409 490 aaPredicted RBP16.79■□□□□ 0.28
CXCL12-206ENST00000395795 GJB3O75712 270 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 CSRP1P21291 193 aaKnown RBP16.79■□□□□ 0.28
CXCL12-206ENST00000395795 SHC2P98077 582 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 LMAN2Q12907 356 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 STARD3Q14849 445 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 DUOXA1Q1HG43 343 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 SH3PXD2AQ5TCZ1 1133 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 OTUD1Q5VV17 481 aaPredicted RBP16.79■□□□□ 0.28
CXCL12-206ENST00000395795 PSAPL1Q6NUJ1 521 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 OR2I1PQ8NGU4 316 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 FIBINQ8TAL6 211 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 TTC17Q96AE7 1141 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 MRGPRX3Q96LB0 322 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 SERPINB11Q96P15 392 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 SLC2A13Q96QE2 648 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 PRMT1Q99873 361 aaKnown RBP16.79■□□□□ 0.28
CXCL12-206ENST00000395795 MTG2Q9H4K7 406 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 THAP9Q9H5L6 903 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 PRSS16Q9NQE7 514 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 SLC6A14Q9UN76 642 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 SLCO1B1Q9Y6L6 691 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 PCNX2A6NKB5 2137 aa16.79■□□□□ 0.28
CXCL12-206ENST00000395795 EPG5Q9HCE0 2579 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 KCNU1A8MYU2 1149 aa16.78■□□□□ 0.28
CXCL12-206ENST00000395795 C10orf142B7Z368 130 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms