RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MYOCOSA0A1B0GUC4 107 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 C19orf81C9J6K1 198 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 SULT1C4O75897 302 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 CYP2C9P11712 490 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 PTPN2P17706 415 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 PTPRAP18433 802 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 NFKBIAP25963 317 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 NAMPTP43490 491 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 ACOT2P49753 483 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 ZBTB17Q13105 803 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 ANGEL2Q5VTE6 544 aaKnown RBP19.4■□□□□ 0.7
HOXC6-202ENST00000394331 CDHR3Q6ZTQ4 885 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 ABRAQ8N0Z2 381 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 ISOC1Q96CN7 298 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 OLFM1Q99784 485 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 RBAKQ9NYW8 714 aaPredicted RBP19.4■□□□□ 0.7
HOXC6-202ENST00000394331 VPS28Q9UK41 221 aa19.4■□□□□ 0.7
HOXC6-202ENST00000394331 K7EPI3 171 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 K7ERI5 159 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 TBXAS1P24557 533 aaPredicted RBP19.39■□□□□ 0.7
HOXC6-202ENST00000394331 SLC5A3P53794 718 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 STX3Q13277 289 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 SEPT6Q14141 434 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 TMEM132BQ14DG7 1078 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 ACAP1Q15027 740 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 DENND5BQ6ZUT9 1274 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 HIPK4Q8NE63 616 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 CPT1BQ92523 772 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 TMIGD2Q96BF3 282 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 FAM84AQ96KN4 292 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 SLITRK1Q96PX8 696 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 GCOM2Q9BZD3 368 aaPredicted RBP19.39■□□□□ 0.7
HOXC6-202ENST00000394331 PORCNQ9H237 461 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 ARHGAP26Q9UNA1 814 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 PCDHB4Q9Y5E5 795 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 SCINQ9Y6U3 715 aa19.39■□□□□ 0.7
HOXC6-202ENST00000394331 TERB1Q8NA31 727 aa19.39■□□□□ 0.69
HOXC6-202ENST00000394331 ZNF420Q8TAQ5 688 aaPredicted RBP19.39■□□□□ 0.69
HOXC6-202ENST00000394331 ADAMTS16Q8TE57 1224 aa19.39■□□□□ 0.69
HOXC6-202ENST00000394331 TDRD1Q9BXT4 1180 aaKnown RBP19.39■□□□□ 0.69
HOXC6-202ENST00000394331 XAB2Q9HCS7 855 aaKnown RBP19.39■□□□□ 0.69
HOXC6-202ENST00000394331 DNAJC28Q9NX36 388 aa19.39■□□□□ 0.69
HOXC6-202ENST00000394331 MYRFQ9Y2G1 1151 aa19.39■□□□□ 0.69
HOXC6-202ENST00000394331 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.69
HOXC6-202ENST00000394331 VNN1O95497 513 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 BPGMP07738 259 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 HMGCS2P54868 508 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 NDUFA5Q16718 116 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 ZBED5Q49AG3 693 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 RSPH3Q86UC2 560 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 CARM1Q86X55 608 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 PHF13Q86YI8 300 aaPredicted RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 PIWIL2Q8TC59 973 aaKnown RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 SERPINI1Q99574 410 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 RTKNQ9BST9 563 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 MECRQ9BV79 373 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 GBA3Q9H227 469 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 ZNF302Q9NR11 478 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 CD58P19256 250 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 GNA15P30679 374 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 NOMO3P69849 1222 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 MRPS5P82675 430 aaKnown RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 KCTD21Q4G0X4 260 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 IL23RQ5VWK5 629 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 SPOPLQ6IQ16 392 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 SLC26A11Q86WA9 606 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 MICALL2Q8IY33 904 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 PDIK1LQ8N165 341 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 TMEM143Q96AN5 459 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 ZMAT2Q96NC0 199 aaKnown RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 WRNIP1Q96S55 665 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 DOK1Q99704 481 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 C11orf70Q9BRQ4 267 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 FRMD8P1Q9BZ68 369 aaPredicted RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 PAIP1Q9H074 479 aaKnown RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 TPK1Q9H3S4 243 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 PNPLA3Q9NST1 481 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 RNF11Q9Y3C5 154 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 MAFBQ9Y5Q3 323 aaPredicted RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 PRSS51A0A1B0GVH4 220 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 TRIM64BA6NI03 449 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 TFPTP0C1Z6 253 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 KITP10721 976 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 EIF2B2P49770 351 aaKnown RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 MAMLD1Q13495 774 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 TMEM270Q6UE05 265 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 SAMD7Q7Z3H4 446 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 TFB1MQ8WVM0 346 aaKnown RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 KBTBD7Q8WVZ9 684 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 SLC7A3Q8WY07 619 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 HSPH1Q92598 858 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 CGRRF1Q99675 332 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 TRIM56Q9BRZ2 755 aaKnown RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 TRNAU1APQ9NX07 287 aaKnown RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 MARCOQ9UEW3 520 aaPredicted RBP19.38■□□□□ 0.69
HOXC6-202ENST00000394331 CNTN6Q9UQ52 1028 aa19.38■□□□□ 0.69
HOXC6-202ENST00000394331 LRRIQ4A6NIV6 560 aa19.37■□□□□ 0.69
HOXC6-202ENST00000394331 TRPA1O75762 1119 aa19.37■□□□□ 0.69
HOXC6-202ENST00000394331 KRT37O76014 449 aa19.37■□□□□ 0.69
HOXC6-202ENST00000394331 C1QBPQ07021 282 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms