RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CSPG4P5Q96PW8 444 aa25.13■■□□□ 1.61
LRFN4-202ENST00000393952 NAP1L3Q99457 506 aaPredicted RBP25.13■■□□□ 1.61
LRFN4-202ENST00000393952 CLEC1BQ9P126 229 aa25.13■■□□□ 1.61
LRFN4-202ENST00000393952 SLC12A6Q9UHW9 1150 aa25.13■■□□□ 1.61
LRFN4-202ENST00000393952 CDH22Q9UJ99 828 aa25.13■■□□□ 1.61
LRFN4-202ENST00000393952 NR2E1Q9Y466 385 aa25.13■■□□□ 1.61
LRFN4-202ENST00000393952 HS3ST4Q9Y661 456 aa25.13■■□□□ 1.61
LRFN4-202ENST00000393952 H3BRJ5 948 aa25.12■■□□□ 1.61
LRFN4-202ENST00000393952 ARL4AP40617 200 aa25.12■■□□□ 1.61
LRFN4-202ENST00000393952 ZXDBP98169 803 aa25.12■■□□□ 1.61
LRFN4-202ENST00000393952 KLF1Q13351 362 aaPredicted RBP25.12■■□□□ 1.61
LRFN4-202ENST00000393952 ZNF572Q7Z3I7 529 aaPredicted RBP25.12■■□□□ 1.61
LRFN4-202ENST00000393952 UNC45BQ8IWX7 931 aa25.12■■□□□ 1.61
LRFN4-202ENST00000393952 CEP112Q8N8E3 955 aa25.12■■□□□ 1.61
LRFN4-202ENST00000393952 PCDH19Q8TAB3 1148 aa25.12■■□□□ 1.61
LRFN4-202ENST00000393952 ADAMTS19Q8TE59 1207 aa25.12■■□□□ 1.61
LRFN4-202ENST00000393952 RNF157Q96PX1 679 aa25.12■■□□□ 1.61
LRFN4-202ENST00000393952 RCOR3Q9P2K3 495 aaPredicted RBP25.12■■□□□ 1.61
LRFN4-202ENST00000393952 ZNF487B1APH4 448 aa25.11■■□□□ 1.61
LRFN4-202ENST00000393952 EEF2KO00418 725 aaKnown RBP25.11■■□□□ 1.61
LRFN4-202ENST00000393952 TBX10O75333 385 aa25.11■■□□□ 1.61
LRFN4-202ENST00000393952 HARS2P49590 506 aaKnown RBP25.11■■□□□ 1.61
LRFN4-202ENST00000393952 DYNLT1P63172 113 aa25.11■■□□□ 1.61
LRFN4-202ENST00000393952 SIX1Q15475 284 aaPredicted RBP25.11■■□□□ 1.61
LRFN4-202ENST00000393952 CLUL1Q15846 466 aa25.11■■□□□ 1.61
LRFN4-202ENST00000393952 CTC1Q2NKJ3 1217 aa25.11■■□□□ 1.61
LRFN4-202ENST00000393952 MICALL1Q8N3F8 863 aa25.11■■□□□ 1.61
LRFN4-202ENST00000393952 SMG9Q9H0W8 520 aaKnown RBP25.11■■□□□ 1.61
LRFN4-202ENST00000393952 SLITRK6Q9H5Y7 841 aa25.11■■□□□ 1.61
LRFN4-202ENST00000393952 CLDND1Q9NY35 253 aa25.11■■□□□ 1.61
LRFN4-202ENST00000393952 EFR3BQ9Y2G0 817 aa25.11■■□□□ 1.61
LRFN4-202ENST00000393952 CTAGE15A4D2H0 777 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 KRIT1O00522 736 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 CST8O60676 142 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 LRIG2O94898 1065 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 TJP3O95049 919 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 KLKB1P03952 638 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 CTAGE8P0CG41 777 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 HOXB8P17481 243 aaPredicted RBP25.1■■□□□ 1.61
LRFN4-202ENST00000393952 CORO1AP31146 461 aaKnown RBP25.1■■□□□ 1.61
LRFN4-202ENST00000393952 DLX2Q07687 328 aaPredicted RBP25.1■■□□□ 1.61
LRFN4-202ENST00000393952 MS4A13Q5J8X5 152 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 POTEHQ6S545 545 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 EP400NLQ6ZTU2 488 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 C14orf80Q86SX3 495 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 CTAGE6Q86UF2 777 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 CTAGE4Q8IX94 777 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 PQLC3Q8N755 202 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 MNS1Q8NEH6 495 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 SPATA4Q8NEY3 305 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 EPAS1Q99814 870 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 MAK16Q9BXY0 300 aaKnown RBP25.1■■□□□ 1.61
LRFN4-202ENST00000393952 AMPD1P23109 780 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 MLLT6P55198 1093 aaPredicted RBP25.1■■□□□ 1.61
LRFN4-202ENST00000393952 TPI1P60174 286 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 C2orf54Q08AI8 447 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 NADSYN1Q6IA69 706 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 RFX8Q6ZV50 586 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 BBS12Q6ZW61 710 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 DENND1CQ8IV53 801 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 CMTM8Q8IZV2 173 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 C1orf74Q96LT6 269 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 ZSWIM3Q96MP5 696 aa25.1■■□□□ 1.61
LRFN4-202ENST00000393952 GAS2L1Q99501 681 aaPredicted RBP25.1■■□□□ 1.61
LRFN4-202ENST00000393952 RBM12Q9NTZ6 932 aaKnown RBP25.1■■□□□ 1.61
LRFN4-202ENST00000393952 CLUHO75153 1309 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 SOBPA7XYQ1 873 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 ACSL4O60488 711 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 SLU7O95391 586 aaKnown RBP25.09■■□□□ 1.61
LRFN4-202ENST00000393952 AVPR1AP37288 418 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 DPYSQ14117 519 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 TFDP2Q14188 446 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 CBX2Q14781 532 aaPredicted RBP25.09■■□□□ 1.61
LRFN4-202ENST00000393952 ARTNQ5T4W7 220 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 RAP1GAP2Q684P5 730 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.09■■□□□ 1.61
LRFN4-202ENST00000393952 MAIP1Q8WWC4 291 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 ARHGEF4Q9NR80 690 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 ARHGAP26Q9UNA1 814 aa25.09■■□□□ 1.61
LRFN4-202ENST00000393952 R3HDM2Q9Y2K5 976 aaKnown RBP25.09■■□□□ 1.61
LRFN4-202ENST00000393952 GOLGA6L7A0A1B0GV03 622 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 FSHRP23945 695 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 HCAR3P49019 387 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 SLC11A2P49281 568 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 ZNF135P52742 658 aaPredicted RBP25.08■■□□□ 1.61
LRFN4-202ENST00000393952 NRG1Q02297 640 aaPredicted RBP25.08■■□□□ 1.61
LRFN4-202ENST00000393952 AUHQ13825 339 aaKnown RBP25.08■■□□□ 1.61
LRFN4-202ENST00000393952 MANEALQ5VSG8 457 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 PRELID2Q8N945 189 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 TTC16Q8NEE8 873 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 ADAM7Q9H2U9 754 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 ETNK2Q9NVF9 386 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 CFAP97Q9P2B7 532 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 NEU3Q9UQ49 428 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 CCL26Q9Y258 94 aa25.08■■□□□ 1.61
LRFN4-202ENST00000393952 E9PAM4 449 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 SCAMP3O14828 347 aaKnown RBP25.07■■□□□ 1.6
LRFN4-202ENST00000393952 GREM1O60565 184 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 LTBRP36941 435 aa25.07■■□□□ 1.6
LRFN4-202ENST00000393952 MTA1Q13330 715 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms