RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 SNRPAP09012 282 aaKnown RBP14.74□□□□□ -0.05
MKS1-203ENST00000393120 GRIK3Q13003 919 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 LPIN1Q14693 890 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 SEPT7Q16181 437 aaKnown RBP14.74□□□□□ -0.05
MKS1-203ENST00000393120 ARL13BQ3SXY8 428 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 INTS6LQ5JSJ4 861 aaKnown RBP14.74□□□□□ -0.05
MKS1-203ENST00000393120 FBXW10Q5XX13 1052 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 STEAP4Q687X5 459 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 LRRC8BQ6P9F7 803 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 CD300LGQ6UXG3 332 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 GPRIN1Q7Z2K8 1008 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 CHSY1Q86X52 802 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 COLGALT1Q8NBJ5 622 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 SERAC1Q96JX3 654 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 PKMYT1Q99640 499 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 PAAF1Q9BRP4 392 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 MOCS1Q9NZB8 636 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 IGSF9Q9P2J2 1179 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 TSC2P49815 1807 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 RNF103O00237 685 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 CREB3O43889 395 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 ALDH1A2O94788 518 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 USP17L7P0C7H9 530 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 NCAM1P13591 858 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 ADRA1DP25100 572 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 ETV4P43268 484 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 CXCR3P49682 368 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 CACNA2D1P54289 1103 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 WASHC5Q12768 1159 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 BNIP1Q12981 228 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 TUSC3Q13454 348 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 FAM47EQ6ZV65 393 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 PPM1NQ8N819 430 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 HHIPL1Q96JK4 782 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 TRIM62Q9BVG3 475 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 COLEC11Q9BWP8 271 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 PRDM12Q9H4Q4 367 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 SLC40A1Q9NP59 571 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 TMPRSS4Q9NRS4 437 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 MKS1Q9NXB0 559 aa14.74□□□□□ -0.05
MKS1-203ENST00000393120 SYNJ2BP-COX16A0A087WUM0 186 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 ARHGEF37A1IGU5 675 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 CFAP73A6NFT4 308 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 SDR42E2A6NKP2 422 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 CXorf49A8MYA2 514 aaPredicted RBP14.73□□□□□ -0.05
MKS1-203ENST00000393120 LPXNO60711 386 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 B3GAT3O94766 335 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 UBOX5O94941 541 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 SF3A3Q12874 501 aaKnown RBP eCLIP14.73□□□□□ -0.051e-6■■■■■ 34.6
MKS1-203ENST00000393120 TRIM32Q13049 653 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 MAPRE1Q15691 268 aaKnown RBP14.73□□□□□ -0.05
MKS1-203ENST00000393120 TRIM71Q2Q1W2 868 aaKnown RBP14.73□□□□□ -0.05
MKS1-203ENST00000393120 DENND5BQ6ZUT9 1274 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 ECHDC2Q86YB7 292 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 CTAGE3PQ8IX95 158 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 CCDC63Q8NA47 563 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 PCSK9Q8NBP7 692 aaKnown RBP14.73□□□□□ -0.05
MKS1-203ENST00000393120 ZNF398Q8TD17 642 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 SPOCK2Q92563 424 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 MYLPFQ96A32 169 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 STAMBPL1Q96FJ0 436 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 NAT9Q9BTE0 207 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 COX16Q9P0S2 106 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 USH1CQ9Y6N9 552 aa14.73□□□□□ -0.05
MKS1-203ENST00000393120 GOLGA8RI6L899 631 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 KRT38O76015 456 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 ERCC2P18074 760 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 HNRNPH1P31943 449 aaKnown RBP14.72□□□□□ -0.05
MKS1-203ENST00000393120 CCNFP41002 786 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 SERPINB9P50453 376 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 PRKCZQ05513 592 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 MGAT5Q09328 741 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 AP1B1Q10567 949 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 FAM182AQ5T1J6 154 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 DCLRE1AQ6PJP8 1040 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 MPP5Q8N3R9 675 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 CCDC33Q8N5R6 958 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 FITM2Q8N6M3 262 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 TTC17Q96AE7 1141 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 ADAM2Q99965 735 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 SLCO1B3Q9NPD5 702 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 ANLNQ9NQW6 1124 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 SMYD2Q9NRG4 433 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 DDIT4Q9NX09 232 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 SLC17A7Q9P2U7 560 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 MAD1L1Q9Y6D9 718 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 COL4A4P53420 1690 aaPredicted RBP14.72□□□□□ -0.05
MKS1-203ENST00000393120 TRIM49D1C9J1S8 452 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 FAM72CH0Y354 149 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 I6L893 689 aaPredicted RBP14.72□□□□□ -0.05
MKS1-203ENST00000393120 MTSS1O43312 755 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 CABYRO75952 493 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 POMCP01189 267 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 IL1BP01584 269 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 PYGBP11216 843 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 TYMPP19971 482 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 CNTFP26441 200 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 GRIA1P42261 906 aa14.72□□□□□ -0.05
MKS1-203ENST00000393120 SKIV2L2P42285 1042 aaKnown RBP14.72□□□□□ -0.05
MKS1-203ENST00000393120 TPI1P60174 286 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms