RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 FOXN2P32314 431 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 CXCR3P49682 368 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 AP1B1Q10567 949 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 SLC24A5Q71RS6 500 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 CD99L2Q8TCZ2 262 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 PLAC1Q9HBJ0 212 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 IKBKGQ9Y6K9 419 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 COL4A4P53420 1690 aaPredicted RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 RNF103O00237 685 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 KIF3CO14782 793 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 OAS1P00973 400 aaKnown RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 AMHP03971 560 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 GBP2P32456 591 aaPredicted RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 SARNPP82979 210 aaKnown RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 TSPY1Q01534 308 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 MBTPS1Q14703 1052 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 GLB1LQ6UWU2 654 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 PDZD4Q76G19 769 aaPredicted RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 PRPF39Q86UA1 669 aaKnown RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 COLGALT1Q8NBJ5 622 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 CCT6BQ92526 530 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 ALKBH8Q96BT7 664 aaKnown RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 PAIP2Q9BPZ3 127 aaKnown RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 TSEN34Q9BSV6 310 aaKnown RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 CFHR5Q9BXR6 569 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 WDCPQ9H6R7 721 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 GPBP1L1Q9HC44 474 aaPredicted RBP19.7■□□□□ 0.74
ERCC2-203ENST00000391944 RAD54BQ9Y620 910 aa19.7■□□□□ 0.74
ERCC2-203ENST00000391944 PTPRDP23468 1912 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 IQANK1A0A1B0GTG1 560 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 F8W810 466 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 INHBAP08476 426 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 PRKCHP24723 683 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 LIG3P49916 1009 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 DENND5BQ6ZUT9 1274 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 BEND5Q7L4P6 421 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 NETO2Q8NC67 525 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 CCNYQ8ND76 341 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 PXYLP1Q8TE99 480 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 PPM1EQ8WY54 764 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 CAPNS2Q96L46 248 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 EBNA1BP2Q99848 306 aaKnown RBP19.69■□□□□ 0.74
ERCC2-203ENST00000391944 PCDHB8Q9UN66 801 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 MYO18AQ92614 2054 aaKnown RBP19.69■□□□□ 0.74
ERCC2-203ENST00000391944 FRMPD3Q5JV73 1810 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 CCT8L1PA6NM43 557 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 ZNF189O75820 626 aaPredicted RBP19.69■□□□□ 0.74
ERCC2-203ENST00000391944 CPP00450 1065 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 ZNF135P52742 658 aaPredicted RBP19.69■□□□□ 0.74
ERCC2-203ENST00000391944 TPI1P60174 286 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 FAM189BP81408 668 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 SLC1A5Q15758 541 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 KDM4CQ9H3R0 1056 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 NLRC5Q86WI3 1866 aa19.69■□□□□ 0.74
ERCC2-203ENST00000391944 ZWINTO95229 277 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 MLNP12872 115 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 GRIA1P42261 906 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 WASHC5Q12768 1159 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 RGS9BPQ6ZS82 235 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 SLC26A11Q86WA9 606 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 LRRC6Q86X45 466 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 SLC43A3Q8NBI5 491 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 RAET1EQ8TD07 263 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 TRIM62Q9BVG3 475 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 EIF2B3Q9NR50 452 aaKnown RBP19.68■□□□□ 0.74
ERCC2-203ENST00000391944 USP15Q9Y4E8 981 aaPredicted RBP19.68■□□□□ 0.74
ERCC2-203ENST00000391944 B4GALT3O60512 393 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 DDHD2O94830 711 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 FSBPO95073 299 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 APOEP02649 317 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 YWHAHQ04917 246 aaPredicted RBP19.68■□□□□ 0.74
ERCC2-203ENST00000391944 DSC1Q08554 894 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 PARP6Q2NL67 630 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 DEFB115Q30KQ5 88 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 LACTB2Q53H82 288 aaPredicted RBP19.68■□□□□ 0.74
ERCC2-203ENST00000391944 UNC5AQ6ZN44 842 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 ZNF280BQ86YH2 543 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 BANPQ8N9N5 519 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 TKTL2Q9H0I9 626 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 RASSF4Q9H2L5 321 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 BRCA2P51587 3418 aa19.68■□□□□ 0.74
ERCC2-203ENST00000391944 NCAM2O15394 837 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 MT-ND3P03897 115 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 FAAP100Q0VG06 881 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 SF3A3Q12874 501 aaKnown RBP eCLIP19.67■□□□□ 0.746e-8■■■■■ 39.6
ERCC2-203ENST00000391944 PDK4Q16654 411 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 CLLU1OSQ5K130 101 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 LHX8Q68G74 356 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 C4orf50Q6ZRC1 276 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 TAC4Q86UU9 113 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 TP53INP2Q8IXH6 220 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 MPP5Q8N3R9 675 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 SCAMP5Q8TAC9 235 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 LINC01599Q8WXQ3 324 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 OR12D3Q9UGF7 316 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 ZNF180Q9UJW8 692 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 GRID1Q9ULK0 1009 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 MAD1L1Q9Y6D9 718 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 NOMO2Q5JPE7 1267 aa19.67■□□□□ 0.74
ERCC2-203ENST00000391944 HHATQ5VTY9 493 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms